Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq537 149 1e-30 seq302 95.1 2e-14 >seq537 Length=102077 Score = 149 bits (164), Expect = 1e-30 Identities = 350/518 (68%), Gaps = 13/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCC-GACGCAAC 42691 || |||||| ||| ||||| || ||||| || ||||||||| || | || | || Sbjct 34763 CCTTGCATCCGGAAAAAGGCTGATTGGGCTATCCGCTGGATCGA-AGACAAAGAGTCTAC 34821 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | || | || || |||||| | || ||||| || ||||||||| || |||| Sbjct 34822 CTTTGCACAGCGTCTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGATCCTT 34881 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAAC 42809 || || ||||||||||| ||| || ||| | ||||| || || ||||| || || Sbjct 34882 TGCGTCAATCTTCTGGCTGAAGAAG--CGTGGCCTTATGCCAGGCCTTACCTTTTCCAAT 34939 Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869 || || ||| | || ||||| | || | ||||| |||||||| || ||||| Sbjct 34940 GAGCTTATCTCTCGTGATGAGGGTTTACACACTGACTTCGCCTGCCTTCTCTTCTC---T 34996 Query 42870 CACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 ||||| | ||| ||| ||| || | | |||||||| || || || | Sbjct 34997 CACCTGCGCCACCGCCCCAGCCCAGAGGCTGTTCAGAAAATCATCACAGAAGCTGTCGCC 35056 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGA 42988 |||||| ||||||||||||| | | || ||| || | || |||| |||||| | | Sbjct 35057 ATCGAGCAGGAGTTCCTCACAGATGCTCT-CCCATGCGCACTTCTCGGAATGAACGCCAA 35115 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCA 43047 ||||||||| | |||||| ||| || || || | ||||| || | |||| | Sbjct 35116 GCTCATGTGCCAATACATCGAGTTTGTTGCTGATCGACTCCTCGTTGC-TCTGGGCAATA 35174 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 |||||||| | | ||| ||||| || ||||| ||||||||| || || | Sbjct 35175 AGAAAGTCTACAACTCTACCAACCCATTCGATTTCATGGACAACATCTCGCTGACTGGAA 35234 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||| ||||| || |||||||| || | ||||||||| Sbjct 35235 AGACTAACTTCTTTGAGAAGCGTGTTGGTGACTACCAG 35272 >seq302 Length=64523 Score = 95.1 bits (104), Expect = 2e-14 Identities = 241/364 (66%), Gaps = 2/364 (1%) Strand=Plus/Minus Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136 ||| |||| || ||||| || ||||| | || | ||||| ||||| | ||||| || Sbjct 55940 GTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGCTCAAGGTAGATGGC 55881 Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGA 245195 | || || || |||||||| ||||||||||| || || | || | ||||| | Sbjct 55880 AAACGCTCCTGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGC-AGTGTTATTGAAAA 55822 Query 245196 TGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCT 245255 ||| || |||| || || ||||| || ||| || || || ||||||| || Sbjct 55821 CGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCAATGTAGGAACCAG 55762 Query 245256 TGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGC 245315 | || | || | | ||| | || | || |||||| ||| || || || || | Sbjct 55761 TACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTTGAAATTAGAGCAC 55702 Query 245316 AGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGC 245375 | | || | |||||| |||||||| |||||||| |||||| | | || |||| Sbjct 55701 AAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGGAAGC 55642 Query 245376 AGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAA 245435 | |||| || ||| |||| ||| | | | |||||| || || || ||| || || | Sbjct 55641 ACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGAGTGA 55582 Query 245436 AGTA 245439 |||| Sbjct 55581 AGTA 55578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944323051799680