Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq302 154 2e-32 >seq302 Length=64523 Score = 154 bits (170), Expect = 2e-32 Identities = 627/971 (65%), Gaps = 34/971 (4%) Strand=Plus/Minus Query 113698 TTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTT 113757 ||| ||||| ||||||||| || ||||| || ||||| | || || || ||| || Sbjct 57170 TTGAGATTGGTCGATGAAGGCACCTCGATCGGCAGCCATCTGAA-CA-ATGGTTCG-CTG 57114 Query 113758 ---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATT 113814 ||||||||| || ||| |||| || || ||||| | |||||||| || || Sbjct 57113 AGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTT 57054 Query 113815 TTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAAT 113874 |||||||||||| || | | || ||| |||||| | | ||||||||||| | Sbjct 57053 TTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAA 56994 Query 113875 CTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 113934 | || |||| || || | ||||||| ||||| || || ||| || Sbjct 56993 GTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACG 56934 Query 113935 TCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 113994 | | |||||||| | ||||| || || ||||| || ||| | |||||| | ||| Sbjct 56933 GCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGC 56875 Query 113995 G-GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAA 114053 ||| ||| || |||||||| || | || | ||||| |||| || | | || Sbjct 56874 TAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGGACTCCATGCT---TAG 56818 Query 114054 TGCGTTCCT---TGAGGGCGTCCCAGTCGTAGTTGAGCTTTG----TCTCCCCCTGCCAC 114106 | |||| | || | ||||| || || || | || | | ||| ||| Sbjct 56817 CGATCTCCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACACCC---CAC 56762 Query 114107 ATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCC 114166 |||||| |||| ||||| || || ||| |||| || || ||| ||| |||||||| Sbjct 56761 ATATCATACTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCG 56702 Query 114167 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATG 114226 ||||||| || | || || ||| | ||||| || ||||| |||||||| Sbjct 56701 TCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATT 56642 Query 114227 CGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA---ATAAAT 114283 || ||||| |||||| || ||||||||| | ||||| |||| | || Sbjct 56641 TGAATATTCAACTGCTTGGCTTCAGGGGAATCAAATGGAAGTCG---CAAAGCGAGGAAA 56585 Query 114284 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT-AGACTTTCG 114342 |||| || ||||| || |||||| | ||||||||||||| | | || | || | Sbjct 56584 GCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTTGCTTCGTTTG 56525 Query 114343 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 114402 || ||| || ||||| | || | ||||| | || || || || ||| || Sbjct 56524 -GCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTTGCGAACGACGAC 56466 Query 114403 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTT 114462 | || | ||| || ||||| | ||||| | | | | | ||| || | | Sbjct 56465 TTGAGTTACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGGT 56406 Query 114463 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCT 114520 ||| | ||| || || |||| ||||| |||| ||||| | | || ||| || Sbjct 56405 AGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCA--GTATTCG 56348 Query 114521 ATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 114580 || || || || || | ||| || || |||| || |||| ||||||||| || ||| Sbjct 56347 ATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTTC 56288 Query 114581 GTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 114640 |||| || ||||||||||| ||||| | || | || ||||| ||||| | || |||| Sbjct 56287 TTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAGA 56228 Query 114641 ATAGCCTTCCA 114651 ||||| | ||| Sbjct 56227 ATAGCATACCA 56217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597343385253440