Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq725 125 7e-24
seq1192 86.0 6e-12
>seq725
Length=19491
Score = 125 bits (138), Expect = 7e-24
Identities = 158/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || |||| | ||| || | |||| || || || || ||||| |||||||| |
Sbjct 8396 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 8337
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| || |||| || |||||||||||||| | || || ||||||||||| ||||||
Sbjct 8336 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 8277
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| |||||||| ||||||||||| ||| || || | ||||| | |||||
Sbjct 8276 ATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCACC 8217
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433
|||| || | |||||| ||||| | |||||| ||||
Sbjct 8216 TCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGACGA 8180
Score = 109 bits (120), Expect = 5e-19
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || |||||||| ||||| | | |||||| |||| || | ||||||||||
Sbjct 8059 GTTGACTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACCGTCCTCCAACTGCTTGCCG 8000
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| |||| || || |||||||| |||||||| ||||| || || || ||||| |||
Sbjct 7999 GCGAAAATCAGACGTTGCTGGTCAGGAGGAATCCCTTCCTTGTCCTGAATTTTGGACTTG 7940
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||| || | ||||||| | | || ||||| | |||| ||||| |||||
Sbjct 7939 ACACTATCGATTGTATCAACCGACTCAACTTCGAGGGTTATAGTCTTTCCGGT 7887
>seq1192
Length=144406
Score = 86.0 bits (94), Expect = 6e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || ||||||||||| || | || |||||| |||| || ||||| || |||
Sbjct 8770 GTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGTTTACCG 8829
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | || || || |||||||||||||| ||||| || || |||
Sbjct 8830 GCGAAGATCAGACGTTGCTGGTCGGGAGGGATTCCCTCCTTGTCT 8874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499636256073920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |