Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq302 134 1e-26 >seq302 Length=64523 Score = 134 bits (148), Expect = 1e-26 Identities = 417/643 (65%), Gaps = 2/643 (0%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | || || | ||||| || ||||||| ||| ||| | || || ||||| Sbjct 55413 AACTACCAATATTTCGGATTCAAGACCCTGGAGAGGTCTTACTTGCTTCGAATCAATGGC 55472 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| | ||||| || || || || | ||||| || || || ||||| ||||| | Sbjct 55473 AAGGTTGCAGAGCGCCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGAT 55532 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||| || | || | | | | | |||| | | ||| | || |||| | Sbjct 55533 GACGTGGAAAGAGTCATTGAGACATATAACCTCATGTCGCAAAAGTACTTCACTCATG-C 55591 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | | || ||||| |||||||| || || || ||| |||||| | ||||| ||||| || Sbjct 55592 CTCTCCTACCCTCTTCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCAT 55651 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 | |||| ||| |||| || |||| |||| ||| || ||||| || Sbjct 55652 TGATATGAAGGAAGACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAAT 55711 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||||| ||| || || || || | | | ||| | | |||| | |||||||| Sbjct 55712 TTCAAAGACCGCCGGTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTGGTTCCTA 55771 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| || || |||||| | || ||||| | || ||||||||||| || ||||| || Sbjct 55772 CATTGCTGGAACGAATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAA 55831 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || | ||||| |||||||| ||| | | | || | || || |||| || Sbjct 55832 CACTGCCAGATACGTCGACCAGGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCT 55891 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| ||||| ||| | | ||| | || || || || ||||||||||| || Sbjct 55892 TGAGCCATGGCATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGA 55951 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 | | || | || || ||| || || ||| || || || ||||||||||| Sbjct 55952 AGAAGTTCGTGCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACG 56011 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 ||| ||||| || | |||| ||| || ||||| |||||| Sbjct 56012 CGTTGAGAAGAATGGTGAATGGACTCTGTTCTGTCCAAATGAA 56054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494714740233280