Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq725 102 8e-17
seq537 95.1 1e-14
>seq725
Length=19491
Score = 102 bits (112), Expect = 8e-17
Identities = 155/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | ||| || || | | |||||||| ||||| ||||| ||
Sbjct 8396 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 8337
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| |||||| || || || |||| ||||||| ||||| ||||| |||||
Sbjct 8336 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 8277
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| |||||||| || || |||| | |||| |||| | | ||| |||| |||||||
Sbjct 8276 ATGCCTTCTTTATCT-TGTATTTTCGACTTAACGTTGT-CGATGGTATCGGATGACTCCA 8219
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|||| | || | || ||||| || |||||||| ||
Sbjct 8218 CCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 8182
>seq537
Length=102077
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/227 (70%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673
|| || || || ||||| ||||||| | || | || || || || || || ||
Sbjct 35045 GAAGCTGTCGCCATCGAGCAGGAGTTCCTCACAGATGCTCTCCCATGCGCACTTCTCGGA 35104
Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733
|||||||| || ||||||| | |||||||||||||| || ||||| || | || |
Sbjct 35105 ATGAACGCCAAGCTCATGTGCCAATACATCGAGTTTGTTGCTGATCGACTCCTCGT--TG 35162
Query 52734 CTC-GGGCA--GCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790
||| ||||| ||||| || |||| || ||| || || || || ||| |||||||
Sbjct 35163 CTCTGGGCAATAAGAAAGT-CTACAACTCTACCAACCCATTCGATTTCATGGACAACATC 35221
Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||| || ||||| ||||| || |||||||| || || || ||
Sbjct 35222 TCGCTGACTGGAAAGACTAACTTCTTTGAGAAGCGTGTTGGTGACTA 35268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496253913912960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |