Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq639 102 8e-17
seq725 96.9 3e-15
>seq639
Length=25736
Score = 102 bits (112), Expect = 8e-17
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || ||||| ||||| | | ||| || || || ||||| || |||||| |||||
Sbjct 21815 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 21874
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
||||||||||||||||| || || |||||||||||| |||||| ||| | | |||
Sbjct 21875 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGTCG 21934
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
| ||| || | |||||| |||| ||| | || ||||| || || || || || ||
Sbjct 21935 ATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 21993
>seq725
Length=19491
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||| ||||| ||||| | || ||| ||| || || ||||||||
Sbjct 8594 GTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCCTCAAGTTGTTTTCCG 8535
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| | || | |||||||||||||| || ||||| || || | | ||| ||| || ||
Sbjct 8534 GCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTAT-CTTGAATTTTTGATTT 8476
Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094
| ||| || | || || | |||||||||||| | || | || || |||||||| |
Sbjct 8475 AACATTG-TCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTCTTTCCGGTCAGGG 8417
Query 127095 TTTTTACAAAAATCTGCAT 127113
|||| || || || |||||
Sbjct 8416 TTTTAACGAAGATTTGCAT 8398
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || |||| || |||| ||| | || ||| || || |||||||| ||
Sbjct 8852 CCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAA 8793
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| || |||||||| ||||| |||| | || |||||||| || ||
Sbjct 8792 AGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGG 8733
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| || |||||| || | | || | ||| || | ||||| |||
Sbjct 8732 ATACCTTCCTTATCTTGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACT 8673
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | |||||||||||||| ||||| || || || ||||||
Sbjct 8672 TCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCATG 8625
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
||||| || | || ||||| || |||||||||||||| | || ||| || ||
Sbjct 8378 ACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGGGTACGACCGTCCTCC 8319
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || || ||| |||| | |||||||| || ||||| ||||| || || ||
Sbjct 8318 AGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCTTGT 8259
Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
|||||| ||| | |||| |||| ||| || | ||| || || | ||| | || ||
Sbjct 8258 ATTTTCGACTTAACGTTG-TCGATGGTATCGGATGACTCCACCTCTAGGGTGATGGTCTT 8200
Query 127084 GCCGGTCAGAGTTTTTAC 127101
||||| |||||||| ||
Sbjct 8199 ACCGGTGAGAGTTTTGAC 8182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475492668936320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |