Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq639 102 8e-17 seq725 96.9 3e-15 >seq639 Length=25736 Score = 102 bits (112), Expect = 8e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || ||||| ||||| | | ||| || || || ||||| || |||||| ||||| Sbjct 21815 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 21874 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 ||||||||||||||||| || || |||||||||||| |||||| ||| | | ||| Sbjct 21875 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGTCG 21934 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | ||| || | |||||| |||| ||| | || ||||| || || || || || || Sbjct 21935 ATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 21993 >seq725 Length=19491 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| ||||| ||||| | || ||| ||| || || |||||||| Sbjct 8594 GTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCCTCAAGTTGTTTTCCG 8535 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | |||||||||||||| || ||||| || || | | ||| ||| || || Sbjct 8534 GCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTAT-CTTGAATTTTTGATTT 8476 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | ||| || | || || | |||||||||||| | || | || || |||||||| | Sbjct 8475 AACATTG-TCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTCTTTCCGGTCAGGG 8417 Query 127095 TTTTTACAAAAATCTGCAT 127113 |||| || || || ||||| Sbjct 8416 TTTTAACGAAGATTTGCAT 8398 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || |||| || |||| ||| | || ||| || || |||||||| || Sbjct 8852 CCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAA 8793 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || |||||||| ||||| |||| | || |||||||| || || Sbjct 8792 AGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGG 8733 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| || |||||| || | | || | ||| || | ||||| ||| Sbjct 8732 ATACCTTCCTTATCTTGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACT 8673 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | |||||||||||||| ||||| || || || |||||| Sbjct 8672 TCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCATG 8625 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || ||||| || |||||||||||||| | || ||| || || Sbjct 8378 ACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGGGTACGACCGTCCTCC 8319 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || ||| |||| | |||||||| || ||||| ||||| || || || Sbjct 8318 AGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCTTGT 8259 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| ||| | |||| |||| ||| || | ||| || || | ||| | || || Sbjct 8258 ATTTTCGACTTAACGTTG-TCGATGGTATCGGATGACTCCACCTCTAGGGTGATGGTCTT 8200 Query 127084 GCCGGTCAGAGTTTTTAC 127101 ||||| |||||||| || Sbjct 8199 ACCGGTGAGAGTTTTGAC 8182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475492668936320