Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq725 127 2e-24
seq302 82.4 7e-11
>seq725
Length=19491
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| || || || ||||||||||||||||||||
Sbjct 8627 ATGCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCC 8568
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | ||| || | ||||||||| ||| | || | || ||||| || ||
Sbjct 8567 GAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGG 8508
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| |||||||||||||||||||||||| ||| | || | || || ||| ||||
Sbjct 8507 GGGATGCCTTCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCG 8448
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || | || || ||||| || ||||| || || ||||||||
Sbjct 8447 ACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 8398
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| || || | | || | || || || || ||||| || ||||| |||||
Sbjct 8399 ATTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCA 8340
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | || |||| || || || ||| | || | || |||||||| ||
Sbjct 8339 GAAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGA 8280
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|||||||||||||||||||| | |||| | | | || | || | ||| ||||| |||||
Sbjct 8279 GGAATGCCTTCTTTATCTTGTA-TTTTCGACTTAACGTTGTCGATGGTATCGGATGACTC 8221
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| || || || | || || ||||| |||||||| ||
Sbjct 8220 CACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 8182
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||| || ||||| || || ||||| |||||||| || || | || | |
Sbjct 8840 CTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCA 8781
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||||| || || | || | |||||||| ||||| || || ||||| |||
Sbjct 8780 TCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTA 8721
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| ||||| ||| | || | ||| ||||| ||| ||||| || ||||
Sbjct 8720 TCTTGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATA 8661
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||| || ||||| || || ||||||||
Sbjct 8660 GTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 8626
>seq302
Length=64523
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 123624 ATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAA 123683
||||||||||| || || ||||||| ||| | ||| || | ||| |||| || || | |
Sbjct 56262 ATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAAAAGAACCTGGGGACTATTAGA 56321
Query 123684 TGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGT 123743
| ||||| ||| |||| || ||||||||| || | ||| |||| || || |||
Sbjct 56322 AGCTCCAATCTATGCACCGAGATCATCGAATACTGCTCACCTGATGAAGTTGCTGTTTGT 56381
Query 123744 AATTTGGCTTCGATT 123758
|| |||||||| |||
Sbjct 56382 AACTTGGCTTCCATT 56396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451995470745280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |