Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq302 163 3e-35 >seq302 Length=64523 Score = 163 bits (180), Expect = 3e-35 Identities = 630/971 (65%), Gaps = 34/971 (4%) Strand=Plus/Minus Query 115659 TTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT 115718 ||| ||||| ||||||||| || ||||| || ||||| | || || || ||| || Sbjct 57170 TTGAGATTGGTCGATGAAGGCACCTCGATCGGCAGCCATCTGAA-CA-ATGGTTCG-CTG 57114 Query 115719 ---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATT 115775 ||||||||| || ||| |||| || || ||||| | |||||||| || || Sbjct 57113 AGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTT 57054 Query 115776 TTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAAT 115835 |||||| ||||| || | | || ||| |||||| | | ||||||||||| | Sbjct 57053 TTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAA 56994 Query 115836 CTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 115895 | | || |||| || || | ||||||| ||||| || || ||| || Sbjct 56993 GTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACG 56934 Query 115896 TCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 115955 | | ||||| || | ||||| || || ||||| || ||| | |||||| | ||| Sbjct 56933 GCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGC 56875 Query 115956 T-GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAA 116014 | ||| ||| || |||||||| || | || | |||||||||| | || || | Sbjct 56874 TAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGGA----CTCCATGCTTA 56819 Query 116015 TGCGTTCC-----TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC--TCCCCCTCCCAC 116067 ||| || || || | ||||| || || || | || | | | ||||| Sbjct 56818 -GCGATCTCCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACAC-CCCAC 56762 Query 116068 ATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCC 116127 |||||| |||| ||||| || || || |||| || || ||| ||| ||||||||| Sbjct 56761 ATATCATACTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCG 56702 Query 116128 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATG 116187 ||||||| || | || || ||| | ||||| || ||||| |||||||| Sbjct 56701 TCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATT 56642 Query 116188 CGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA---ATAAAT 116244 || ||||| |||||| || ||||||||| | || || |||| | || Sbjct 56641 TGAATATTCAACTGCTTGGCTTCAGGGGAATCAAATGGAAGTCG---CAAAGCGAGGAAA 56585 Query 116245 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCG 116303 |||| || ||||| || |||||| | ||||||||||||| | | || | || | Sbjct 56584 GCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTTGCTTCGTTTG 56525 Query 116304 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 116363 || ||| || ||||| | || | ||||| | || || || || ||| || Sbjct 56524 -GCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTTGCGAACGACGAC 56466 Query 116364 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTT 116423 | || | ||| || ||||| | ||||| | | | | | ||| || | | Sbjct 56465 TTGAGTTACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGGT 56406 Query 116424 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC--TTATCAGTGTACTCT 116481 ||| | ||| || || |||| ||||| |||| ||||| | | |||| | || Sbjct 56405 AGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCAGTAT--TCG 56348 Query 116482 ATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 116541 || || || || || | ||| || || |||| || |||| ||||||||| || ||| Sbjct 56347 ATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTTC 56288 Query 116542 GTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 116601 |||| || |||||||||||||||||| | || | || ||||| ||||| | || |||| Sbjct 56287 TTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAGA 56228 Query 116602 ATAGCCTTCCA 116612 ||||| | ||| Sbjct 56227 ATAGCATACCA 56217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613496709026880