Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq639 104 3e-17 seq725 86.0 7e-12 >seq639 Length=25736 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| |||||||| || || ||| || || |||| |||||||||||||| ||||| | Sbjct 21813 CCTTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 21872 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| |||||||| |||| || | | |||||||||| || ||| ||| | | Sbjct 21873 TCAATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGT 21932 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | || ||||| || || || || | |||||||| |||||||| || || || || | Sbjct 21933 CGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 21992 Query 46584 AG 46585 || Sbjct 21993 AG 21994 >seq725 Length=19491 Score = 86.0 bits (94), Expect = 7e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || |||||||| || || || || || |||| || ||||||||||||||||| Sbjct 8361 CTCCTTCTGAATATTGTAATCAGAAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAA 8302 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || || || || || ||| ||| | ||| Sbjct 8301 GATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCTTGTATTTTCGACTT-AACGT 8243 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || ||||| || | |||||||| || || || || ||||| | Sbjct 8242 TGTCGATGGTATCGGATGACTCCACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGA 8183 Query 46581 C 46581 | Sbjct 8182 C 8182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565228734423360