Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq725 134 5e-26 >seq725 Length=19491 Score = 134 bits (148), Expect = 5e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||||||||| ||||| || || || || || ||||| || || || Sbjct 8397 AATGCAAATCTTCGTTAAAACCCTGACCGGAAAGACCATCACACTTGAAGTCGAGAGTTC 8456 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||||| | ||||| ||||||||||||||| ||||| || || || ||||| Sbjct 8457 AGATACGATTGACAATGTTAAATCAAAAATTCAAGATAAAGAAGGCATCCCCCCCGATCA 8516 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || || | |||||| | || ||||||||||| ||||| | ||| | |||||||||| Sbjct 8517 GCAGCGCCTTATTTTCGCCGGAAAACAACTTGAGGATGGTCGTACTCTCTCGGATTATAA 8576 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 8577 TATCCAAAAGGAGTCCACTCTTCA 8600 Score = 132 bits (146), Expect = 2e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| ||||| || ||||||||||| ||||| ||||| || Sbjct 8626 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGCTCC 8685 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | ||||| ||||| |||||||||||||| || || || ||||| Sbjct 8686 GATACCATTGATAATGTTAAATCTAAAATCCAAGATAAGGAAGGTATCCCACCGGATCAG 8745 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| |||| || | || ||||| || || ||||| | ||| | |||| || ||| Sbjct 8746 CAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCGGACTCTTTCGGACTACAAT 8805 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 8806 ATCCAGAAGGA 8816 Score = 86.0 bits (94), Expect = 2e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 391074 ACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAA 391133 || || || ||||| || || || ||||| || ||||| || || | | || Sbjct 7887 ACCGGAAAGACTATAACCCTCGAAGTTGAGTCGGTTGATACAATCGATAGTGTCAAGTCC 7946 Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 |||||||| || |||||||| ||||||||||| || |||||| | |||||| | || || Sbjct 7947 AAAATTCAGGACAAGGAAGGGATTCCTCCTGACCAGCAACGTCTGATTTTCGCCGGCAAG 8006 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCAC 391253 || | || || || | || | | |||||||| ||| | ||||| |||| || ||| Sbjct 8007 CAGTTGGAGGACGGTCGCACCCTTTCTGATTATAACATTCAGAAGGAGTCAACTCTCCAC 8066 Query 391254 TTAGT 391258 || || Sbjct 8067 TTGGT 8071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975683770595744