Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq583 125 5e-23 >seq583 Length=30596 Score = 125 bits (138), Expect = 5e-23 Identities = 881/1397 (63%), Gaps = 35/1397 (3%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| || || || | ||||| |||||||| |||||||| || || | | || || Sbjct 3266 ATACCGTTCGCGTCGACGTCAAAGGTGACTTCGATTTGAGGAACGCCACGGGGCGCGGGG 3207 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | || | || || || ||||| || ||| |||||| Sbjct 3206 GGGATACCGGTTAGCTCGAACTTGCCGAGGAGGTTGTTATCCTTGGTGCGGGCACGTTCA 3147 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 ||||| || | ||||| || | | || || || | | ||| || | | ||| Sbjct 3146 CCCTCAAAGACCTGGATGAGCACGCCTGGCTGGTTGTCGGCA-AAGGTGGAGAACGTCTC 3088 Query 517454 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 || || || || || || |||||||| | || | |||||| | ||||| || Sbjct 3087 AGACTTCTTGGTGGGGATAGTGGTGTTTCTCTTGATGAGTGGGGTCATGACGCCACCCGC 3028 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 517570 || || | ||| | ||| ||||||| ||| |||| || | || | || | || || Sbjct 3027 AGTCTCGATACCGACAGACAGAGGAGCGACGTCAAGGAGAAGGATTTCATTGGTAGACTT 2968 Query 517571 TCA--TCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 517627 | || || | ||| |||||| | || || || | || ||||||||||||||||| Sbjct 2967 GGACGTC-GTGTCGCCAGACAAGA-TGGCGGCCTGGACGGCGGCACCATATGCAACAGCC 2910 Query 517628 TCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGT 517687 || || || || | | | ||| | | || || ||||| || | || | ||| | | Sbjct 2909 TCGTCGGGGTTGATGGACTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGATACAAGCT-T 2851 Query 517688 CTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 517746 || | || ||||| | ||||| || || | || || ||||| || ||||| Sbjct 2850 CTGGATGCGGGGGATACGGGTGGATCCACCCACAAGGACTATCTCATGGACGCTAGATTT 2791 Query 517747 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTC 517806 ||| | |||| ||| | || ||||| || || | | | || | ||| Sbjct 2790 ATCGATCTTTGCATCGCGGAGCACGCGCTCAACAGGGTCCATGGTGGAGCGGAAGAGGTC 2731 Query 517807 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAA 517866 ||||| || ||||| ||| | ||| | | | || ||||||| || ||| | Sbjct 2730 CTGGCAAAGCTCCTCGAAACGAGCACGAGTGATGGAGGTATAGAAATCAATGCCCTCGTA 2671 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 | || || | ||| || | || || | | ||| || || | || || |||||||| Sbjct 2670 TAGGGAGTCGATTTCGATGGATGTCTGTGCGGCAGAGGAGAGGGTGCGCTTGGCACGTTC 2611 Query 517927 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC---TGATTGATTCAAATCTGTTTTATA 517983 || || || | || | || | ||| || ||| ||| | ||| | || | Sbjct 2610 GCAGGCAGTGCGGAGACGGCGGAGGGCACGAGCATTTGAA-GAT--AGATCCTTCTTGTG 2554 Query 517984 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 518043 || | |||||| || | ||| | | || || || ||||| ||||| ||||| || Sbjct 2553 CTTGCGCTTGAATTCATTGACAAAGTGGTTCACGAGGCGGTTATCGAAATCCTCACCACC 2494 Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103 | | || | || | || | | |||| ||| | || ||||| | || | || Sbjct 2493 AAGATGGGTGTCACCAGCAGTGGACTTGACTTCGAAGATGCCCTCTTCGATAGTGAGGAG 2434 Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163 | |||||| ||| |||||||||| || || || || || || ||| || Sbjct 2433 GGAGACATCAAAGGTACCACCACCCAAGTCGAAGATGAGAACGTTGCGTTCACCCTCGGC 2374 Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 || || ||||||||||| |||| || |||||||| ||||| || ||||| | | || Sbjct 2373 CTTCTTGTCAAGACCATAGGCAATGGCGGCAGCAGTGGGTTCGTTGATAATCCGAAGGAC 2314 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 ||| || ||||| || || ||||| || || ||||| | || |||||||| ||||| Sbjct 2313 ATTCAGGCCAGCGATGAGACCAGCATCCTTGGTAGCTTGACGCTGGGAATCGTTGAAATA 2254 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTAC--TTCTTTACCAATATAAGCGCTTGCCGTT 518341 || || ||||||| ||||| | | || | | | |||| || | || ||| Sbjct 2253 GGCGGGGACAGTAACGACGGCGTTGTTAACAGTGCCT--CCAAGGTAGGACTCGGCAGTT 2196 Query 518342 TGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCA 518401 | | |||| || | | | ||| || || |||| || |||| | ||||| ||| Sbjct 2195 TCTCTCATCTTCGTCAGGACCATGGAGGAGATTTCCTCCGGGGTGAACTGCTTCTCTTCG 2136 Query 518402 TTTTGATATGATACTTCAA--AATATG-GTTTATTACCAACATT---AATAACTTTAAAT 518455 | ||| || |||| | ||| | || || | || ||| || || || Sbjct 2135 CCCT----TGA-AC-TCAACGGAGATGACTGGCTTTCCCGCCTTGTCAATGACCTTGAAG 2082 Query 518456 GGCCAGTATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCG 518514 || ||| ||||| || ||||| || || || || || | | ||||| | || Sbjct 2081 GGGAAGTGCTTCATGTCGGATTGGAC-CTCAGGATCGGCGAATTTGCGGCCAATGAGACG 2023 Query 518515 TTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCC 518574 || || ||||| | || |||| || || || || |||||| |||||| ||||| || Sbjct 2022 CTTGGCGTCAAAGACTGTGTTGGAGGGGTTCATGGCGACTTGATTTTTGGCGGCATCCCC 1963 Query 518575 AATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATC 518634 |||||| | || || ||||| || | ||| | || || || || || ||||| || || Sbjct 1962 GATCAGACGCTCGGTGTCTGTGAAGGCAACGAACGAGGGTGTGGTCCGGTTACCCTGGTC 1903 Query 518635 ATTCGCAATAATTTCAA 518651 || ||||| ||||||| Sbjct 1902 GTTGGCAATGATTTCAA 1886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780754515333808