Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq302 163 4e-35 seq537 129 7e-25 >seq302 Length=64523 Score = 163 bits (180), Expect = 4e-35 Identities = 631/966 (65%), Gaps = 24/966 (2%) Strand=Plus/Plus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | ||||||||| || ||||||| |||||||||| || | |||||| ||||| || Sbjct 56217 TGGTATGCTATTCTCGAGGCTCAAACTGAGACTGGTAACCCCTTTATGCTCTACAAGGAT 56276 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 || || ||| | ||||| || |||||||| |||| || | || ||||| || || Sbjct 56277 GCTTGCAACAAGAAGAGCAACCAAAAGAACCTGGGGACTATTAGAAGCTCCAATCTATGC 56336 Query 112398 ACAGAAATCTTGGAATT-TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 112456 || || ||| | |||| | | || ||||| ||||| |||||| | || || || Sbjct 56337 ACCGAGATCATCGAATACTGCTCACCT-GATGAAGTTGCTGTTTGTAACTTGGCTTCCAT 56395 Query 112457 CGCTCTCCCCAAGTATGTGGATCCAGAGACAA-AGACATTTGATTATGAAAAACTCCACG 112515 || | || | | |||||| | | | ||| || ||||| || || ||||||| Sbjct 56396 TGCCTTACCTACCTTCGTGGATGCTGTGCGTGGAGA-ATATGATTTTGGCAAGCTCCACG 56454 Query 112516 AAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG 112575 |||| || || ||| ||||| |||||| | || || |||| | || || | Sbjct 56455 AAGTAACTCAAGTCGTCGTTCGCAACCTTAACAGAATCATCGACCGAAACTACTATCCAG 56514 Query 112576 TTGAGACTGCTCGTA--AATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGG 112633 | ||| || | | || | || | | || || ||||||| |||||| || || Sbjct 56515 TCGAGGAAGC-CAAACGAAGC-AACTTCCGCCATCGCCCAATTGCCTGCGGTGTTCAGGG 56572 Query 112634 TCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 112692 ||| || |||| ||| | ||||| || | ||||||||||| ||||| ||| | Sbjct 56573 TCTTGCTGATGCTTTCCTCGCTTTG-CGACTTCCATTTGATTCCCCTGAAGCCAAGCAGT 56631 Query 112693 TCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GGCGAGTTCGGAGTTG 112751 | ||| | || ||||| ||||| || |||||| | |||| ||| | ||| | Sbjct 56632 TGAATATTCAAATTTTTGAAACAATTTACCACGCCTGT-TTGACTGCGTCCTGTGAGCTA 56690 Query 112752 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT 112811 || ||||||| || |||||| | | ||| |||||||||| ||||| || | ||| Sbjct 56691 GCTAAGGTTGACGGCCCATATTCCTCATATGAAGGTTCTCCAGTCTCACAGGGCATCCTT 56750 Query 112812 CAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTCTCAAGGA 112870 || | ||||||||||| || | || | | || || || ||||| |||| || | Sbjct 56751 CAGTATGATATGTGGG-GTGTCACTCCCACCGATCTCTGGGATTGGGATTCTCTGAAACA 56809 Query 112871 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTC 112930 ||| || | || | || |||||| | | | || || ||||| || ||| Sbjct 56810 GGAGATCGCTAAGCATGGAGTCCGCAACAGTTTGCTTGTTGCTCCCATGCCTACTGCCAG 56869 Query 112931 CAC-CGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATC 112989 ||| || | |||||| | || |||||||| ||||| ||||| | || ||||| Sbjct 56870 CACTAGCCAGATTCTTGGAT-TCAACGAATGCTTCGAACCTTACACCTCTAATATCTACT 56928 Query 112990 TGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCA 113049 | | | ||| || || ||||| ||||||||| | || || | ||||| Sbjct 56929 CGCGCCGTGTCCTTGCAGGCGAGTTCCAAATTGTCAACCCGTGGCTTTTGAAGGACCTGG 56988 Query 113050 AAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCA 113109 || | |||||||||||| | | |||||| ||| || | || || || |||| Sbjct 56989 TGGACTTGGGTCTCTGGTCCGACAACATGAAGAATCGAATTATTGCAGATGGAGGCTCCA 57048 Query 113110 TTCAAAATATTGTGGATATTCCAGATGAAAT-TAAGAAGTTGTACCGCACAGTTTGGGAA 113168 | ||||| ||| |||| ||| | || || ||| | || ||| || || |||||| Sbjct 57049 TCCAAAACATTCCCAATATCCCACAGGATATCAAAGCACTT-TACAAAACCGTCTGGGAA 57107 Query 113169 ATC---AAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAA 113225 ||| || ||| | | || | ||||| || ||||| ||| |||||| || ||| Sbjct 57108 ATCTCTCAG-CGAACCA--TTGTTCAGATGGCTGCCGATCGAGGTGCCTTCATCGACCAA 57164 Query 113226 AGTCAA 113231 |||| Sbjct 57165 TCTCAA 57170 >seq537 Length=102077 Score = 129 bits (142), Expect = 7e-25 Identities = 156/207 (75%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 102167 ||||||| || || | || || || ||||||||||| ||| | || |||||| Sbjct 34758 CAGTTCCTTGCATCCGGAAAAAGGCTGATTGGGCTATCCGCTGGATCGAAGACAAAGAGT 34817 Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227 | | ||||||| |||| ||| |||| ||||| ||| || |||||||||||| ||| Sbjct 34818 C-TACCTTTGCACAGCGTCTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGA 34876 Query 102228 TCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 ||||| |||| | || | ||||| |||||||| || || |||||||| || ||| || Sbjct 34877 TCCTT-TGCGTCAATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTC 34935 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGG 102313 ||| ||||||||||||||||| ||||| Sbjct 34936 CAATGAGCTTATCTCTCGTGATGAGGG 34962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620731785304960