Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq302 138 1e-27 seq925 104 3e-17 seq570 98.7 1e-15 seq432 87.8 2e-12 >seq302 Length=64523 Score = 138 bits (152), Expect = 1e-27 Identities = 407/627 (65%), Gaps = 3/627 (0%) Strand=Plus/Minus Query 110578 GGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637 |||||||| || | ||| | ||| || |||||| | ||||| || || ||||| || Sbjct 56047 GGACAGAACAGAGTCCATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTC 55988 Query 110638 CACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697 || | || ||| || ||||| |||| | ||||| | || ||||| || || Sbjct 55987 CAAAGTGCAAGGAATAGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGA 55928 Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTA 110757 ||||| || || | |||||| |||||||| || || |||| || | | ||| Sbjct 55927 TCCAAGAATTCAAAAATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGG 55868 Query 110758 CGACG---ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 || ||| |||||| || || | || ||| |||||| || | |||||||||| Sbjct 55867 CGCTTGTTACCTCCCTGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGA 55808 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG 110874 | |||||| | || ||||| || || ||| ||| | | |||| ||| | Sbjct 55807 ACAATTCCGTTTGAAGAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGG 55748 Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTA 110934 || || | | |||||||||||| || ||| |||| | ||||| | | || || Sbjct 55747 TGAATGTTAAGACCAATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTG 55688 Query 110935 CCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGA 110994 ||||||| || || || ||| |||| | |||| || ||||| || | ||||||| Sbjct 55687 TCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGA 55628 Query 110995 GGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGAC 111054 || | || || || || |||||||| ||||| | |||||| |||| ||| ||| Sbjct 55627 GGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGAC 55568 Query 111055 ATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACT 111114 || ||| ||||| || | | || || | ||||| || ||||| ||||| Sbjct 55567 ATGAGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACA 55508 Query 111115 CGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTC 111174 ||||| | ||| | || || || | ||| |||| | || | | |||| | Sbjct 55507 CGCATAATCATGTGCTGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGAC 55448 Query 111175 TTCTCTAGGGTCTTGAGACCAAAGTAT 111201 |||| |||||||||| || || ||| Sbjct 55447 CTCTCCAGGGTCTTGAATCCGAAATAT 55421 >seq925 Length=142694 Score = 104 bits (114), Expect = 3e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 136707 ACCGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTC 136766 |||| || ||||||||||||||||||||||||||||| |||||||||||||| || |||| Sbjct 100553 ACCGGTCCTATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTC 100612 Query 136767 GAGCCCCGTTGGGAACA 136783 || || |||||||| || Sbjct 100613 GACCCTCGTTGGGACCA 100629 Score = 104 bits (114), Expect = 3e-17 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 136707 ACCGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTC 136766 |||| || ||||||||||||||||||||||||||||| |||||||||||||| || |||| Sbjct 101235 ACCGGTCCTATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTC 101176 Query 136767 GAGCCCCGTTGGGAACAGCT 136786 || || |||||||| || || Sbjct 101175 GACCCTCGTTGGGACCATCT 101156 >seq570 Length=92907 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 || ||||||||||||||||||||||||||||| |||||||||||||| || |||||| || Sbjct 75198 TCCTATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCC 75257 Query 136772 CCGTTGGGAACA 136783 |||||||| || Sbjct 75258 TCGTTGGGACCA 75269 >seq432 Length=131617 Score = 87.8 bits (96), Expect = 2e-12 Identities = 216/323 (67%), Gaps = 10/323 (3%) Strand=Plus/Plus Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 ||| || | ||| ||||||||||| ||||||| ||||| ||| ||| || || Sbjct 105279 CTTTCCAATAGCATCAATCTCATCAATGAATATAATACAAGGTGTGTTTTTCCGGGCGGT 105338 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG- 11791 | | || || ||||| || || | ||||| || || |||||||| ||||| | | Sbjct 105339 TGCAAACAGATCACGGACTCGGGAGGGGCCAACGCCAACAAACATCTCGACGAACTCAGA 105398 Query 11792 -CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGA 11850 | || ||| ||| | || ||||| ||||| ||||| | || || || | Sbjct 105399 CCCGC-TAACGCTGTA-AAATGGAACGCCTGACTCGCCAGCTGTAGCCTTTGCTAGCAAC 105456 Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA--- 11907 |||||||| ||||| |||| || | |||| || || | |||||||||||||||| Sbjct 105457 GTCTTACCGGTACCCGGTGGCCCTGAAAGAATAGCACCTCTGGGGATCTTGGCACCAAGC 105516 Query 11908 CTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTG 11967 | | ||| | |||| || ||||| || ||| |||| ||| || || ||||| Sbjct 105517 CGTTGAAACT---GCTCCGGTTTCTTAAGAAAGCTGACAAATTCCATAATCTCAACCTTG 105573 Query 11968 GCGGAGTCGATACCCTCAACATC 11990 || ||| ||||| | ||||| Sbjct 105574 GCCTCGTCCATACCGGCTACATC 105596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588965928510400