Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq302 134 2e-26
seq537 111 2e-19
seq432 93.3 5e-14
>seq302
Length=64523
Score = 134 bits (148), Expect = 2e-26
Identities = 582/904 (64%), Gaps = 20/904 (2%)
Strand=Plus/Minus
Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810
||||||||| || || ||| || |||||||| | |||||||| | || |||||
Sbjct 57110 GATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTTTTG 57051
Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870
|| || || || | | || ||| |||||| | | |||||| ||||| | |
Sbjct 57050 GATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAAGTC 56991
Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930
| || || || | || | ||||||||| ||||| || || ||| | |
Sbjct 56990 CACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACGGCG 56931
Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCG-G 105989
| ||||| || | ||||| ||||| |||||||| || | |||||| | || |
Sbjct 56930 CGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGCTAG 56872
Query 105990 TGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGC 106049
|| ||| || ||||| || || | | | |||||| || | || | | |||
Sbjct 56871 TGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGGACTCCATGCTTAGCGATCT 56812
Query 106050 GTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAA 106107
| || ||| |||||| || || || | | || | || ||||||||||| |
Sbjct 56811 CCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACAC-CCCACATATCATA 56754
Query 106108 TTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC 106167
||||| | || || || |||||||| ||| ||| ||| | || | | |
Sbjct 56753 CTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCGTCAACCTT 56694
Query 106168 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227
||| | |||||| ||| || | ||||| || || |||||||| || || |||
Sbjct 56693 AGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATTTGAATATT 56634
Query 106228 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGA 106286
|| || |||||||||| |||||||||| | || ||| | | || |||| || |
Sbjct 56633 CAACTGCTTGGCTTCAGGGGAATCAAATG-GAAGTCGCAAAGCGAGGAAAGCATCAGCAA 56575
Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCA 106345
|||| |||||||| | |||| || | || || | || | || | || |||
Sbjct 56574 GACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTTGCTTCGTTTG-GCTTCCTCG 56516
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT--CTTT-GTG 106402
|| ||||| | |||| ||| |||| || ||| || || | ||| | ||| ||
Sbjct 56515 ACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTT---GCGAACGACGACTTGAGTT 56459
Query 106403 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 106462
| ||| || || || || ||||| | | | | | ||| || | | || | |
Sbjct 56458 ACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGGTAGGTAAG 56399
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC--TTATCTGTGTACTCTAAAATTT 106520
|| || || ||||| || |||||||| ||||| | | | || | || | || |
Sbjct 56398 GCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCAGTAT--TCGATGATCT 56341
Query 106521 CTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGC 106580
| || || | ||||| || |||| ||||||| ||||||||||| ||||| |||||||
Sbjct 56340 CGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTTCTTGTTGC 56281
Query 106581 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCT 106640
| ||||||||||||||||| |||| | || ||||| || || | || |||||| || |
Sbjct 56280 AAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAGAATAGCAT 56221
Query 106641 TCCA 106644
|||
Sbjct 56220 ACCA 56217
Score = 131 bits (144), Expect = 2e-25
Identities = 374/572 (65%), Gaps = 11/572 (2%)
Strand=Plus/Minus
Query 106739 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 106798
|||||||| | | ||||||||| |||| ||||| |||| || |||||| || |||||
Sbjct 56062 CCTGGTGCTTCATTTGGACAGAACAGAGTCCATTCACCATTCTTCTCAACGCGTTTCATA 56003
Query 106799 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 106858
|| || || || |||| || | || ||||| | | ||| | ||||| | ||
Sbjct 56002 AATAGATCAGGTGTCCAAAGTGCAAGGAATAGATCACGAGCACGAACTTCTTCCTTGCCG 55943
Query 106859 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 106918
||||| || | || | ||| || | |||||| |||||||||||||| ||||
Sbjct 55942 TGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGCTCAAGGTAGATG 55883
Query 106919 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 106972
|| | | ||| | | ||| || | || | || || | || ||| ||
Sbjct 55882 GCAAACGCTCC---TGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGCAGTGTTATTG 55826
Query 106973 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 107032
|| ||||| ||||| |||| ||| || | ||| ||||| || || ||| ||
Sbjct 55825 AAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCAATGTAGGAA 55766
Query 107033 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 107092
| | | | | || |||| | |||||||| || || |||||| ||| |
Sbjct 55765 CCAGTACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTTGAAATTAGA 55706
Query 107093 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 107152
||||| | || || |||| || || | ||| ||| ||||| | | || |||
Sbjct 55705 GCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGG 55646
Query 107153 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 107212
||||| || |||||| || || |||||||| ||||||||||| || | || |||
Sbjct 55645 AAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGA 55586
Query 107213 ATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271
|||| ||| ||| ||||| || |||||||| | ||| || | ||| || ||
Sbjct 55585 GTGAA-GTACTTTTGCGACATGAGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCC 55527
Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGT 107303
|||||| || || || |||||||||| |||||
Sbjct 55526 GTGGATCCCAATAGCAACACGCATAATCATGT 55495
>seq537
Length=102077
Score = 111 bits (122), Expect = 2e-19
Identities = 303/457 (66%), Gaps = 18/457 (4%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCA-TCAAGGCTA-ATGTTTTCCA 117043
||||| ||||| ||||||||||||||||| ||||| ||| ||| || | ||||| ||||
Sbjct 35268 TAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGTCA--GCGAGATGTTGTCCA 35211
Query 117044 TAAAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGA 117097
| || || ||||| || | | ||| | | | || | | |||| ||
Sbjct 35210 TGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCCCAGAGCAAC------GA 35157
Query 117098 GGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGA 117157
|||| ||||| | ||| |||| ||||| | | |||| || | |||||| |||| |
Sbjct 35156 GGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGAA 35097
Query 117158 GATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 117217
| |||||||| || || || |||| | | ||| || | || || ||| | | ||
Sbjct 35096 GTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGCTTCTGTGATGA 35037
Query 117218 TGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277
| || | || || | |||| | | |||| |||||| ||| |
Sbjct 35036 TTTTCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGAGAAGGCAGGCGA 34977
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||| | ||||||||| || || ||||| ||||| || ||| ||||||||||
Sbjct 34976 AGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGGTAAGGCCTGGCA 34917
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 117396
| || || |||||||||| ||| | || | |||| || || || ||||||||||||
Sbjct 34916 TAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCA-AAGGATCCACTGAAGAAGATACCT 34858
Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
|| ||| ||||| || | || |||| || ||||
Sbjct 34857 TCGACAGCAGCAAAGGCGACGAGACGCTGTGCAAAGG 34821
>seq432
Length=131617
Score = 93.3 bits (102), Expect = 5e-14
Identities = 91/115 (79%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGA 9420
|||||| | |||||||||||||||||||| | |||||| ||| || ||||| ||||||
Sbjct 105279 CTTTCCAATAGCATCAATCTCATCAATGAATATAATACAAGGTGTGTTTTTC-CGGGCGG 105337
Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475
|| |||| ||||| || || | || ||| || |||||||||||||| || ||
Sbjct 105338 TTGCAAACAGATCACGGACTCGGGAGGGGCCAACGCCAACAAACATCTCGACGAA 105392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589970711328320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |