Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq302 134 2e-26 seq537 111 2e-19 seq432 93.3 5e-14 >seq302 Length=64523 Score = 134 bits (148), Expect = 2e-26 Identities = 582/904 (64%), Gaps = 20/904 (2%) Strand=Plus/Minus Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810 ||||||||| || || ||| || |||||||| | |||||||| | || ||||| Sbjct 57110 GATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTTTTG 57051 Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870 || || || || | | || ||| |||||| | | |||||| ||||| | | Sbjct 57050 GATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAAGTC 56991 Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930 | || || || | || | ||||||||| ||||| || || ||| | | Sbjct 56990 CACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACGGCG 56931 Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCG-G 105989 | ||||| || | ||||| ||||| |||||||| || | |||||| | || | Sbjct 56930 CGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGCTAG 56872 Query 105990 TGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGC 106049 || ||| || ||||| || || | | | |||||| || | || | | ||| Sbjct 56871 TGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGGACTCCATGCTTAGCGATCT 56812 Query 106050 GTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAA 106107 | || ||| |||||| || || || | | || | || ||||||||||| | Sbjct 56811 CCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACAC-CCCACATATCATA 56754 Query 106108 TTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC 106167 ||||| | || || || |||||||| ||| ||| ||| | || | | | Sbjct 56753 CTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCGTCAACCTT 56694 Query 106168 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227 ||| | |||||| ||| || | ||||| || || |||||||| || || ||| Sbjct 56693 AGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATTTGAATATT 56634 Query 106228 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGA 106286 || || |||||||||| |||||||||| | || ||| | | || |||| || | Sbjct 56633 CAACTGCTTGGCTTCAGGGGAATCAAATG-GAAGTCGCAAAGCGAGGAAAGCATCAGCAA 56575 Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCA 106345 |||| |||||||| | |||| || | || || | || | || | || ||| Sbjct 56574 GACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTTGCTTCGTTTG-GCTTCCTCG 56516 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT--CTTT-GTG 106402 || ||||| | |||| ||| |||| || ||| || || | ||| | ||| || Sbjct 56515 ACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTT---GCGAACGACGACTTGAGTT 56459 Query 106403 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 106462 | ||| || || || || ||||| | | | | | ||| || | | || | | Sbjct 56458 ACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGGTAGGTAAG 56399 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC--TTATCTGTGTACTCTAAAATTT 106520 || || || ||||| || |||||||| ||||| | | | || | || | || | Sbjct 56398 GCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCAGTAT--TCGATGATCT 56341 Query 106521 CTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGC 106580 | || || | ||||| || |||| ||||||| ||||||||||| ||||| ||||||| Sbjct 56340 CGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTTCTTGTTGC 56281 Query 106581 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCT 106640 | ||||||||||||||||| |||| | || ||||| || || | || |||||| || | Sbjct 56280 AAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAGAATAGCAT 56221 Query 106641 TCCA 106644 ||| Sbjct 56220 ACCA 56217 Score = 131 bits (144), Expect = 2e-25 Identities = 374/572 (65%), Gaps = 11/572 (2%) Strand=Plus/Minus Query 106739 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 106798 |||||||| | | ||||||||| |||| ||||| |||| || |||||| || ||||| Sbjct 56062 CCTGGTGCTTCATTTGGACAGAACAGAGTCCATTCACCATTCTTCTCAACGCGTTTCATA 56003 Query 106799 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 106858 || || || || |||| || | || ||||| | | ||| | ||||| | || Sbjct 56002 AATAGATCAGGTGTCCAAAGTGCAAGGAATAGATCACGAGCACGAACTTCTTCCTTGCCG 55943 Query 106859 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 106918 ||||| || | || | ||| || | |||||| |||||||||||||| |||| Sbjct 55942 TGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGCTCAAGGTAGATG 55883 Query 106919 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 106972 || | | ||| | | ||| || | || | || || | || ||| || Sbjct 55882 GCAAACGCTCC---TGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGCAGTGTTATTG 55826 Query 106973 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 107032 || ||||| ||||| |||| ||| || | ||| ||||| || || ||| || Sbjct 55825 AAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCAATGTAGGAA 55766 Query 107033 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 107092 | | | | | || |||| | |||||||| || || |||||| ||| | Sbjct 55765 CCAGTACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTTGAAATTAGA 55706 Query 107093 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 107152 ||||| | || || |||| || || | ||| ||| ||||| | | || ||| Sbjct 55705 GCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGG 55646 Query 107153 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 107212 ||||| || |||||| || || |||||||| ||||||||||| || | || ||| Sbjct 55645 AAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGA 55586 Query 107213 ATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271 |||| ||| ||| ||||| || |||||||| | ||| || | ||| || || Sbjct 55585 GTGAA-GTACTTTTGCGACATGAGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCC 55527 Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGT 107303 |||||| || || || |||||||||| ||||| Sbjct 55526 GTGGATCCCAATAGCAACACGCATAATCATGT 55495 >seq537 Length=102077 Score = 111 bits (122), Expect = 2e-19 Identities = 303/457 (66%), Gaps = 18/457 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCA-TCAAGGCTA-ATGTTTTCCA 117043 ||||| ||||| ||||||||||||||||| ||||| ||| ||| || | ||||| |||| Sbjct 35268 TAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGTCA--GCGAGATGTTGTCCA 35211 Query 117044 TAAAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGA 117097 | || || ||||| || | | ||| | | | || | | |||| || Sbjct 35210 TGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCCCAGAGCAAC------GA 35157 Query 117098 GGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGA 117157 |||| ||||| | ||| |||| ||||| | | |||| || | |||||| |||| | Sbjct 35156 GGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGAA 35097 Query 117158 GATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 117217 | |||||||| || || || |||| | | ||| || | || || ||| | | || Sbjct 35096 GTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGCTTCTGTGATGA 35037 Query 117218 TGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | || | || || | |||| | | |||| |||||| ||| | Sbjct 35036 TTTTCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGAGAAGGCAGGCGA 34977 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| | ||||||||| || || ||||| ||||| || ||| |||||||||| Sbjct 34976 AGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGGTAAGGCCTGGCA 34917 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 117396 | || || |||||||||| ||| | || | |||| || || || |||||||||||| Sbjct 34916 TAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCA-AAGGATCCACTGAAGAAGATACCT 34858 Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 || ||| ||||| || | || |||| || |||| Sbjct 34857 TCGACAGCAGCAAAGGCGACGAGACGCTGTGCAAAGG 34821 >seq432 Length=131617 Score = 93.3 bits (102), Expect = 5e-14 Identities = 91/115 (79%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGA 9420 |||||| | |||||||||||||||||||| | |||||| ||| || ||||| |||||| Sbjct 105279 CTTTCCAATAGCATCAATCTCATCAATGAATATAATACAAGGTGTGTTTTTC-CGGGCGG 105337 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475 || |||| ||||| || || | || ||| || |||||||||||||| || || Sbjct 105338 TTGCAAACAGATCACGGACTCGGGAGGGGCCAACGCCAACAAACATCTCGACGAA 105392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589970711328320