Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq725 98.7 6e-16
>seq725
Length=19491
Score = 98.7 bits (108), Expect = 6e-16
Identities = 136/190 (72%), Gaps = 8/190 (4%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||| | || || |||||||||||||| || |||||| | || | || ||
Sbjct 8072 AACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACCGTCCTC 8013
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|| ||| || ||||| || || || ||||||||||| | || | ||| ||||||||
Sbjct 8012 CAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGGAATCCCTTCCTTGTCCTG 7953
Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947
||| || ||||| |||||||| ||| | | |||||| |||| |||||| |
Sbjct 7952 AATTTTGGACTTGAC----ACTATCGATTGTATCAACCGACTCAACTTCGAGGGTTATAG 7897
Query 34948 TTTTTCCCGT 34957
| ||||| ||
Sbjct 7896 TCTTTCCGGT 7887
Score = 86.0 bits (94), Expect = 4e-12
Identities = 152/222 (68%), Gaps = 10/222 (5%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
||||||| | || | | ||||||||||| ||| || |||||||| || || || |
Sbjct 8398 TTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAG 8339
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
||||| | || | || |||||||| || ||||| || ||||| || ||||||||| | |
Sbjct 8338 AAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAG 8279
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGC 34927
| | || || || || || ||| || ||| |||| ||||| | |
Sbjct 8278 GAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGAT-----GA 8224
Query 34928 CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||| || || | ||| ||||| || || |||||||| || ||
Sbjct 8223 CTCCACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 8182
Score = 86.0 bits (94), Expect = 4e-12
Identities = 159/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| |||| ||| |||| |||| || | ||||| || ||||| || || |||||||||
Sbjct 8852 CCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAA 8793
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| || |||||||| || ||||| ||||| |||||||| || | ||
Sbjct 8792 AGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGG 8733
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930
| || ||||| || || || ||| || || |||| || || | |||
Sbjct 8732 ATACCTTCCTTATCTTGGATTTTAGATTTAAC--AT--TATCAATGGTATCGGAGCTCTC 8677
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||| || | || || ||||| || || || || || || ||||| |||||
Sbjct 8676 AACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 8626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324628187546304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |