Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq725 136 3e-26 seq583 114 1e-19 seq416 100 2e-15 >seq725 Length=19491 Score = 136 bits (150), Expect = 3e-26 Identities = 166/222 (75%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||||||| || |||||||| || ||| ||||| ||||| ||||| | ||||| Sbjct 8616 GAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGG--ATATTATAATCCGAGAGAGTA 8559 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||| ||||||||||||||||| |||||||| | |||||||| || || || ||| Sbjct 8558 CGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCT 8499 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAG 563432 |||||||||||||||||| ||| || ||||| ||||| | | || ||| || Sbjct 8498 TCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCGAC-TTCAAG 8440 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || || || || ||||||||||| |||||||| Sbjct 8439 TGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 8398 Score = 107 bits (118), Expect = 2e-17 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || ||||| || || || || || |||||||| || | ||||| | ||| Sbjct 8837 AGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCC 8778 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || || ||||| || ||||| || || | ||||||||| || || || ||||| |||||| Sbjct 8777 TCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCT 8718 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTT 563442 || ||||| ||| || ||||| ||||| | | | ||| || |||| |||| Sbjct 8717 TGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATAGTT 8658 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || || ||||||||||| |||||||| Sbjct 8657 TTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 8626 >seq583 Length=30596 Score = 114 bits (126), Expect = 1e-19 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || ||||| || || || || ||||||||||| || |||||||| | || Sbjct 2242 ACTGTCCCCGCCTATTTCAACGATTCCCAGCGTCAAGCTACCAAGGATGCTGGTCTCATC 2301 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || ||||| ||||| |||||||| ||||| |||||||| || |||| ||||| Sbjct 2302 GCTGGCCTGAATGTCCTTCGGATTATCAACGAACCCACTGCTGCCGCCATTGCCTATGGT 2361 Query 550529 CTTGATAA 550536 ||||| || Sbjct 2362 CTTGACAA 2369 >seq416 Length=49574 Score = 100 bits (110), Expect = 2e-15 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || ||||| || |||||||||||||| |||||||| || | || Sbjct 39381 ACAGTCCCCGCCTACTTCAATGATTCTCAACGTCAAGCTACCAAAGATGCCGGTCAAATC 39322 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || || || ||||| ||| || ||||||| ||||| |||||||| ||||| || || Sbjct 39321 GCCGGTCTCAACGTTCTCCGTGTTGTCAATGAGCCTACCGCTGCTGCTCTTGCCTACGGT 39262 Query 550529 CTTGA 550533 || || Sbjct 39261 CTCGA 39257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029223653990320