Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq302 192 7e-44 seq432 116 4e-21 seq537 111 2e-19 >seq302 Length=64523 Score = 192 bits (212), Expect = 7e-44 Identities = 735/1128 (65%), Gaps = 32/1128 (3%) Strand=Plus/Plus Query 75830 TATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTAT 75888 |||||| |||| ||||||| ||| || | | || | | || | ||||| | ||||| Sbjct 56169 TATGAAAAGGAAGGTAGAGGCAAGAAAACCAT-CAAGGCCCAGAAGCTTTGGTATGCTAT 56227 Query 75889 TCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAA 75948 |||| | | || || |||||||| | || | |||||| |||||||||||||| ||||| Sbjct 56228 TCTCGAGGCTCAAACTGAGACTGGTAACCCCTTTATGCTCTACAAGGATGCTTGCAACAA 56287 Query 75949 GAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTT 76008 |||||| ||||||||||| |||| || || | ||||| ||||| ||||| || || | Sbjct 56288 GAAGAGCAACCAAAAGAACCTGGGGACTATTAGAAGCTCCAATCTATGCACCGAGATCAT 56347 Query 76009 AGAGTACACAGATAA--GGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCA 76066 || | || | | | ||||| |||||||| || ||||| || || ||| | || Sbjct 56348 CGA--ATACTGCTCACCTGATGAAGTTGCTGTTTGTAACTTGGCTTCCATTGCCTTACCT 56405 Query 76067 AAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCAC-AAA 76125 | | || ||| | | | | | ||||| || || || || ||| | || || Sbjct 56406 ACCTTCGTGGATGCTGTGCGTGGAGAATATGATTTTGGCAAGCTCCACGAAGTAACTCAA 56465 Query 76126 G--ATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACT 76183 | | ||| | || || ||| || |||| ||| |||| | ||||| || ||| Sbjct 56466 GTCGTCGTTCGC---AACCTTAACAGAATCATCGACCGAAACTACTATCCAGTCGAGGAA 56522 Query 76184 GCGCGAAAG-TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGA 76242 || | || | || | || || | || |||| | |||||||| ||||| || || Sbjct 56523 GC-CAAACGAAGCAACTTCCGCCATCGCCCAATTGCCTGCGGTGTTCAGGGTCTTGCTGA 56581 Query 76243 TGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTC 76301 || || | | ||| || | |||||||||| |||||||||| || ||||| || Sbjct 56582 TGCTTTCCTCGCTTTGCGACTTC-CATTTGATTCCCCTGAAGCCAAGCAGTTGAATATTC 56640 Query 76302 GTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCC 76361 || |||||||| || || ||||| | || ||| ||||| | ||| | | Sbjct 56641 AAATTTTTGAAACAATTTACCACGCCTGTTTGACTGCGTCCTGTGAGCTAGCTAAGGTTG 56700 Query 76362 AAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATA 76421 | || | ||| ||| ||| |||||||| | || || || | ||||||| ||||| Sbjct 56701 ACGGCCCATATTCCTCATATGAAGGTTCTCCAGTCTCACAGGGCATCCTTCAGTATGATA 56760 Query 76422 TGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAA 76479 |||||| || | || | | || || || |||||| ||| || | ||| Sbjct 56761 TGTGGG-GTGTCACTCCCACCGATC-TCTGGGATTGGGATTCTCTGAAACAGGAGATCGC 56818 Query 76480 GGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCAC-CGCAC 76538 || | || | || |||||| | | | || || ||||| || ||| ||| || Sbjct 56819 TAAGCATGGAGTCCGCAACAGTTTGCTTGTTGCTCCCATGCCTACTGCCAGCACTAGCCA 56878 Query 76539 AAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAA 76598 | |||||| | || |||||||| ||||| ||||| | || |||||| | | | Sbjct 56879 GATTCTTGGAT-TCAACGAATGCTTCGAACCTTACACCTCTAATATCTACTCGCGCCGTG 56937 Query 76599 CCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTG 76658 ||| ||||| ||||| ||||||||| | || | || ||||| | | | | Sbjct 56938 TCCTTGCAGGCGAGTTCCAAATTGTCAACCCGTGGCTTTTGAAGGACCTGGTGGACTTGG 56997 Query 76659 GTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATA 76718 ||||||||||| | | |||||| ||| || | || || || ||||| ||||| | Sbjct 56998 GTCTCTGGTCCGACAACATGAAGAATCGAATTATTGCAGATGGAGGCTCCATCCAAAACA 57057 Query 76719 TCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATC---AAGA 76775 | | |||||||| | |||||||| || ||| || || ||||||||| || Sbjct 57058 TTCCCAATATCCCACAGGATATCAAAGCACTTTACAAAACCGTCTGGGAAATCTCTCAG- 57116 Query 76776 TGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTA 76835 ||| | | || | ||||| || ||||| ||| |||||| || ||| |||| | Sbjct 57117 CGAACCA--TTGTTCAGATGGCTGCCGATCGAGGTGCCTTCATCGACCAATCTCAATCTC 57174 Query 76836 TGAATCTATTCA-TGGAAAG-TCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGC 76893 | || |||||| | ||| | || || ||| ||| | | ||||| | || Sbjct 57175 TCAA--TATTCACTTGAAGGAGCCCACCATGGGTAAGATTACCAGCATGCACTTCACCGG 57232 Query 76894 GTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAGGC 76941 ||||||| || | || || || ||||| |||||||| ||| ||| Sbjct 57233 CTGGAAACTCGGCTTGAAGACTGGCATGTATTATCTCCGTACAATGGC 57280 Score = 123 bits (136), Expect = 3e-23 Identities = 377/580 (65%), Gaps = 11/580 (2%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| | ||||| || || || || |||||||| || ||| | || || Sbjct 55487 CCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAGAGT 55546 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 75329 | | |||||||| || ||||| ||| ||| |||| ||| || | || ||||||| Sbjct 55547 CATTGAGACATATAACCTCATGTCGCAAAAGTAC-TTCACTCATGCCTCTCCTACCCTCT 55605 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| |||||||| || || |||||| || |||||||| || | | ||||| | Sbjct 55606 TCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAG 55665 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || ||| | || || |||| || || | ||||| | ||| |||||| || | Sbjct 55666 ACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCG 55725 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| | |||| || | | | | | || ||| || || | Sbjct 55726 GTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTGGTTCCTACATTGCTGGAACGA 55785 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 |||| ||| | || ||| |||| ||||| ||||| || || ||| || | || | Sbjct 55786 ATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACG 55845 Query 75570 TAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 | | || ||| || |||| || | | || ||||| | || ||||||| Sbjct 55846 TCGACCA---GGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCCATGGC 55902 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 || ||||| | || ||| | || | || ||||| || | ||||| | ||| Sbjct 55903 ATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTCGTG 55962 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | ||||| || | || |||| || || || || ||||| || |||||| || Sbjct 55963 CTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAGA 56022 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGG 75783 |||| ||||| |||| ||||||||| | | |||||||| Sbjct 56023 ATGGTGAATGGACTCTGTTCTGTCCAAATGAAGCACCAGG 56062 >seq432 Length=131617 Score = 116 bits (128), Expect = 4e-21 Identities = 279/414 (67%), Gaps = 21/414 (5%) Strand=Plus/Minus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||||||||||||| |||| || |||| | || || ||||| || ||||| | Sbjct 105513 TGGTGCCAAGATCCCCAGAGGTGCTATTCTTTCAGGGCCACCGGGTACCGGTAAGACGTT 105454 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392 || || || | || || || ||| || ||||| | ||| | | || | | Sbjct 105453 GCTAGCAAAGGCTACAGCTGGCGAGTCAGGCGTTCCATTT-TACAGCGTTA-GCGGGTCT 105396 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || || |||||||||||||| || || || | || || ||||| |||| || | Sbjct 105395 GAGTTCGTCGAGATGTTTGTTGGCGTTGGCCCCTCCCGAGTCCGTGATCTGTTTGCAACC 105336 Query 175453 GCCCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG-- 175509 ||||| ||||| || ||| |||||| | |||||||||||||||||||| | || ||| Sbjct 105335 GCCCG-GAAAAACACACCTTGTATTATATTCATTGATGAGATTGATGCTATTGGAAAGTC 105277 Query 175510 --CAACGCAG--CGC---TGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAA 175562 | || || ||| ||||||| | |||||| ||| | || ||| | || Sbjct 105276 GAGATCGAAGAACGCTTATGGTGGT------GGAAATGATGAGCGCGAGAGCACATTGAA 105223 Query 175563 TCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGC 175622 ||| | || ||||| ||||||||||| ||| | | |||||||| | || | Sbjct 105222 TCAGATCCTGACCGAAATGGATGGCTTCAACACCTCGGATCAAGTTGTGGTTCTGGCTGG 105163 Query 175623 CACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGA 175676 || ||||| || |||||||| ||| | || | | || || ||||| ||||| Sbjct 105162 AACCAATCGAGTCGATATCCTAGATAAGGCGTTGTTGCGACCTGGTCGATTTGA 105109 >seq537 Length=102077 Score = 111 bits (122), Expect = 2e-19 Identities = 303/457 (66%), Gaps = 18/457 (4%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || |||| || | || ||||| ||| || |||||||||||| || || | Sbjct 34821 CCTTTGCACAGCGTCTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGATCCT 34880 Query 65129 TCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 | |||| | || | ||| |||||||||| || || ||||||||||| ||| || ||| Sbjct 34881 T-TGCGTCAATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTCCAAT 34939 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247 || ||||| || || ||||||||| | ||| || || ||| |||||| Sbjct 34940 GAGCTTATCTCTCGTGATGAGGGTTTACACACTGACTTCGCCTGCCTTCTCTTCTCTCAC 34999 Query 65248 TTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307 |||| | | |||| | || || | || ||| | | ||| || || | || Sbjct 35000 CTGCGCCACCGCCCCAGCCCAGAGGCTGTTCAGAAAATCATCACAGAAGCTGTCGCCATC 35059 Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367 ||| | | |||| || || || |||||||| || |||| |||||| | || Sbjct 35060 GAGCAGGAGTTCCTCACAGATGCTCTCCCATGCGCACTTCTCGGAATGAACGCCAAGCTC 35119 Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACC 65426 |||| | | ||||| |||| ||| | ||||| |||||| |||| | | || Sbjct 35120 ATGTGCCAATACATCGAGTTTGTTGCTGATCGACTCCTC------GTTGCTCTGGGCAAT 35173 Query 65427 CA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACAT-TAGCCTTGA-TG 65479 | | | ||| | | || ||||| || || ||||| ||||| | || ||| || Sbjct 35174 AAGAAAGTCTACAACTCTACCAACCCATTCGATTTCATGGACAACATCTCGC--TGACTG 35231 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | ||||| ||||||||||||||||| ||||| ||||| Sbjct 35232 GAAAGACTAACTTCTTTGAGAAGCGTGTTGGTGACTA 35268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596559398659840