Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq725 107 3e-18 seq537 100 4e-16 >seq725 Length=19491 Score = 107 bits (118), Expect = 3e-18 Identities = 149/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| || ||||||| |||| ||||| || || ||| | |||||||| ||| Sbjct 8397 AATGCAAATCTTCGTTAAAACCCTGACCGGAAAGACCATCACACTTGAAGTCGAGAGTTC 8456 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| || || ||| ||||| ||||||||||||||||| || || || || Sbjct 8457 AGATACGATTGACAATGTTAAATCAAAAATTCAAGATAAAGAAGGCATCCCCCCCGATCA 8516 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || | | |||| ||||| || || || || ||| | ||| | || ||||||| Sbjct 8517 GCAGCGCCTTATTTTCGCCGGAAAACAACTTGAGGATGGTCGTACTCTCTCGGATTATA- 8575 Query 156002 TATATCCAAA--GAGGCGACGCTTCAT 156026 ||||||||| ||| | || |||||| Sbjct 8576 -ATATCCAAAAGGAGTCCACTCTTCAT 8601 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || ||||||| |||| || ||||||||||| | ||||| || || Sbjct 8626 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGCTCC 8685 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || ||| |||||| |||||||| ||||| || || || || || Sbjct 8686 GATACCATTGATAATGTTAAATCTAAAATCCAAGATAAGGAAGGTATCCCACCGGATCAG 8745 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | || | ||| ||||| |||||||| ||| | ||| | || || || ||| Sbjct 8746 CAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCGGACTCTTTCGGACTACAAT 8805 Query 156003 AT 156004 || Sbjct 8806 AT 8807 >seq537 Length=102077 Score = 100 bits (110), Expect = 4e-16 Identities = 204/296 (69%), Gaps = 8/296 (3%) Strand=Plus/Minus Query 18414 CTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTT 18473 |||||| || || ||||| || ||||| | | || || |||| || || ||| ||| Sbjct 34671 CTTTGGT-TCCTTGATATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTT 34613 Query 18474 CCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC-GGGATATTGAAT-CTCGCTATA 18531 |||| ||||| |||| || || ||| ||||| |||| | || | ||| | | Sbjct 34612 CCATCATGATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTC-CGCTG 34554 Query 18532 AAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAAC 18591 ||| | || || | |||||||| || || || || | | ||||| |||||||| || Sbjct 34553 AAA-CGCTCGACGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGAC 34495 Query 18592 ATATTTAATGAAATGTTTTTCATTATCCTTGAG---ATTGTTCCATTCATCTATATCTTT 18648 | | ||||| | | || | ||| || | ||||||||| |||| | |||||| Sbjct 34494 GTGTGAGATGAAGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTT 34435 Query 18649 TGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTT 18704 || |||||||||||||| | |||||||| |||| || || | |||||||||| Sbjct 34434 CGAGAGATCAACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACATTT 34379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731859484988800