Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq725 104 4e-17
>seq725
Length=19491
Score = 104 bits (114), Expect = 4e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||| || || || | || || | || || | |||||||||||||| |||| |
Sbjct 8807 ATATTGTAGTCCGAAAGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGT 8748
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || || ||||| || ||||| |||||||| |||||| ||| |||||| || |||
Sbjct 8747 TGCTGATCCGGTGGGATACCTTCCTTATCTTGGATTTTAGATTTAACATTATCAATGGTA 8688
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || ||||| || ||||| ||||| || || | ||||||| ||| || |||
Sbjct 8687 TCGGAGCTCTCAACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGC 8628
Query 172068 AT 172069
||
Sbjct 8627 AT 8626
Score = 102 bits (112), Expect = 1e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | || || | || | ||| | ||| | ||| || |||||||||||
Sbjct 8627 ATGCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCC 8568
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || | || || | |||||| || || ||||| | | ||| || || ||
Sbjct 8567 GAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGG 8508
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| ||||| ||| ||||| || |||||||| ||
Sbjct 8507 GGGATGCCTTCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCG 8448
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| || || ||||| || || || | ||||||| ||| || ||||||
Sbjct 8447 ACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCATT 8397
Score = 89.7 bits (98), Expect = 9e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920
|| || || | ||| | ||| || |||||| ||||| || | | || |||| |||
Sbjct 8378 ACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGGGTACGACCGTCCTCC 8319
Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980
| || || || || || |||| | ||| ||||| || || || |||||||||||||||
Sbjct 8318 AGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCTTGT 8259
Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040
||||| || || || || ||||| || || || || ||||| || ||||| |||
Sbjct 8258 ATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCACCTCTAGGGTGATGGTCTTA 8199
Query 172041 CCAGTTAATGTTTT 172054
|| || | |||||
Sbjct 8198 CCGGTGAGAGTTTT 8185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905120522174400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |