Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq302 129 2e-24 seq481 95.1 4e-14 seq981 84.2 6e-11 >seq302 Length=64523 Score = 129 bits (142), Expect = 2e-24 Identities = 351/534 (66%), Gaps = 5/534 (1%) Strand=Plus/Minus Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029 || || | |||||| || ||||| || || |||||||| |||||| ||| |||| Sbjct 55954 TCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGC 55895 Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086 || || || || ||||| || | |||| || ||||| || || || | ||| Sbjct 55894 TCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGCA 55835 Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146 || |||||||| || | |||||||||| ||| || || |||| |||||| ||||| | Sbjct 55834 GTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCA 55775 Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206 || | ||||||| || | ||||| | || ||||||||||| | || Sbjct 55774 ATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTT 55715 Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266 |||||| |||| || || | || | |||| || || || || || | ||| Sbjct 55714 GAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATA 55655 Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGT 156326 | || ||||||| | ||||| | || || ||||||||||| || ||||| Sbjct 55654 TCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGA 55595 Query 156327 GTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTC-CTTAATCTTCTCAAG 156385 | |||||| | || ||||| | ||||| | |||||||| | | |||| || | Sbjct 55594 GAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTCTCAATGACTCTT-TCCAC 55536 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 | | ||||| || | |||| || | ||| ||| ||||| || |||||| ||| Sbjct 55535 GTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGCTGTGGGCGCTCTGCAAC 55476 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 | |||| ||||| || | ||| | | ||||| || || || |||||||| Sbjct 55475 CTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTGAATCCGAAATA 55422 >seq481 Length=342430 Score = 95.1 bits (104), Expect = 4e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 354015 GGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAAC 354074 ||||||| | || |||||||||||||| ||||| ||||| |||||||| |||| || | Sbjct 303449 GGCGAGACCGCCCAGCGAGTCACGGTCAAGGAAGTTAGTTGGTTCGTCGAGGACGAGCAG 303390 Query 354075 GTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134 ||| || | ||||||| || | || || || || || |||||||| |||||||| || Sbjct 303389 GTGTGGATTGTTCCACATGGCGCCGGCGAGGACGACTTTGACCTTCTGACCGCCTGAGAG 303330 >seq981 Length=68931 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || ||||| |||| ||||| |||||||| ||||||||| Sbjct 2698 AGAATTTCCTTGAGACGTGGTACACCGAGGGTAACGTT---CTTGGACGACACACCAGCA 2754 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| ||||||| || | || || | ||||| ||||| |||||||| | Sbjct 2755 AAATGGAAGGTATTCAAGGTCATCTGCGTTGCCGGCTCTCCAATTGACTGTGCCGCCAAA 2814 Query 301933 ATACCAACCATTTCTCCTGG 301952 | || |||||||| ||||| Sbjct 2815 ACGCCCACCATTTCACCTGG 2834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471791802717016