Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq725 129 5e-25 >seq725 Length=19491 Score = 129 bits (142), Expect = 5e-25 Identities = 171/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| ||||||| || ||||| |||||||||||||| ||||| || | || Sbjct 8626 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGCTCC 8685 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | |||| | ||| |||||||| || ||||| || || || ||||| Sbjct 8686 GATACCATTGATAATGTTAAATCTAAA-ATCCAAGATAAGGAAGGTATCCCACCGGATCA 8744 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880 |||||| | |||||||| || |||||||| |||||| ||| || | | || || || Sbjct 8745 GCAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCG-GACTC-TTTCGGACTAC 8802 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || ||||| || || || |||| || ||||||| || ||| Sbjct 8803 AATATCCAGAAGGAGAGCACTCTCCATCTGGTCCTGAGATTGCGGGGTGGC 8853 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 ||||| || |||||||| || || || || || || || | |||| || | || ||| Sbjct 8185 AAAACTCTCACCGGTAAGACCATCACCCTAGAGGTGGAGTCATCCGATACCATCGACAAC 8244 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | ||| | ||| || ||||| |||||||| || ||||| || || || || | ||||| Sbjct 8245 GTTAAGTCGAAA-ATACAAGATAAAGAAGGCATTCCTCCAGACCAGCAGCGCCTAATCTT 8303 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 ||||| || ||||||||||| | | | | || ||||| || ||||| ||||| || Sbjct 8304 CGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTTTCTGATTACAATATTCAGAAGGAGTC 8363 Query 24898 GACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| | || |||| ||||| Sbjct 8364 CACTCTTCACTTGGTTCTTCGTCTGCGTGGAGG 8396 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || ||||| || |||||||| || | || ||| | || | || || Sbjct 7887 ACCGGAAAGACTATAACCCTCGAAGTTGAGTCGGTTGATACAATCGATAGTGTCAAGTCC 7946 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 || || || ||||| ||||| || ||||| || || |||||| |||| || ||||| || Sbjct 7947 AAAATTCAGGACAAGGAAGGGATTCCTCCTGACCAGCAACGTCTGATTTTCGCCGGCAAG 8006 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||| ||||||| | | | | || |||||||||||||| ||||| || || || ||| Sbjct 8007 CAGTTGGAGGACGGTCGCACCCTTTCTGATTATAACATTCAGAAGGAGTCAACTCTCCAC 8066 Query 24908 TTGGT 24912 ||||| Sbjct 8067 TTGGT 8071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449889906751040