Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq666 113 7e-19 seq779 109 9e-18 seq1236 89.7 8e-12 seq302 89.7 8e-12 >seq666 Length=32018 Score = 113 bits (124), Expect = 7e-19 Identities = 317/472 (67%), Gaps = 16/472 (3%) Strand=Plus/Plus Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 || || |||||||| || ||||| || |||||||| || |||||||| || | ||| Sbjct 19901 GCCAACGCAAAGATTTTCCGCTGATCAACTCCGCCAAATTGCGCGTCGACATCCAAATGC 19960 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTG--AGCGGCGGGTTGCGGT 2411620 | ||| || | ||||||||||||||||| | ||| ||| ||||||| ||| Sbjct 19961 TCCTCATCCAACGCCTGCATGAGCGGGTATATGAG--CCCTGACAGCGGCGCATTGTCAA 20018 Query 2411621 CCATCTTGACCACCTGGGCGGCGGCCTTTTGCGC--CGTGCCGACGGTCACGCGCGCCG- 2411677 || ||| || |||| || ||||||||| ||| ||||| | ||||| | ||| | Sbjct 20019 CCTGCTTCACAACCTCCGCACCGGCCTTTTTCGCATCGTGC--TCAGTCAC-CACGCTGC 20075 Query 2411678 TCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAA 2411737 | || | || ||||| | ||||| |||| ||||||| || ||||| | || | Sbjct 20076 TGAGTCTGAATAGGTCCATGGTGTATCGGGCGGAGAGCTGGTAGTCACTGCCCAGGACGA 20135 Query 2411738 ATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCGT 2411797 | ||||| || | ||||| ||| | ||| | ||| |||| | | || Sbjct 20136 ACTCGAGTTTCTCGATGGGGACATGGATGGCTTCGAGGAGGGCGGTGATTACGTAGCGGT 20195 Query 2411798 ACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCG 2411856 | | |||| |||| | |||||||| || | || ||||||||| | || Sbjct 20196 AGTATTCGGC-GCGGTAGTTGACGAGGTTAATGGGTGCTTTCAGGTTGTCGAGGAAGCCG 20254 Query 2411857 TGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTA 2411916 || | ||| || | |||||| | || | || || || ||||| |||| ||| ||||| Sbjct 20255 TGGATGTCTGCTAGGAGGATTTTGACGTGGCAGCCTGCTTGGAGGAAGTGGGCGAGTTTG 20314 Query 2411917 AAGAT-GGGCACAAAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCC 2411966 | ||| ||||| |||||||| ||| || ||| |||| || | |||||||| Sbjct 20315 ACGATCGGGCA-GAAGTAGCCGCAG-TGTGGCCTGCCGGTTGTTGCGGTGCC 20364 >seq779 Length=35737 Score = 109 bits (120), Expect = 9e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||||||||| || || ||||| |||| || || | || ||||||||||| ||||| Sbjct 1989 GCCGCCAACTATCTTGATATCAAAGCCCTGCTAGACGTAGGCTGCAAGACCGTCGCCAAT 1930 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||||||||| || || ||||| |||||||| |||||| || ||| Sbjct 1929 TTGATCAAGGGCAAGTCGCCAGATGATATCCGGAAGACCTTCAACATCCAGAACG 1875 >seq1236 Length=117574 Score = 89.7 bits (98), Expect = 8e-12 Identities = 114/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 2019250 CGGCGGCCCAGCAGGCCCTCCGATCGA-CCATGGAAAAGTACACCAACACGACGCGGTTT 2019308 ||||| ||||||| |||||||| |||| ||||||| | || ||| || || || || Sbjct 86042 CGGCG-CCCAGCAAGCCCTCCG-TCGAACCATGGAGATATATTCCACAACCACCCGCTTC 86099 Query 2019309 GCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATC 2019368 || | |||||||| |||| | |||||||| |||| || || || |||||| Sbjct 86100 GCATTCGCCTGCAATCAGTCGAATAAAATCATCGAACCCCTGCAATCTCGCTGTGCCATC 86159 Query 2019369 TTGCGCTTTGCGCGCCTCACCGACGCCCAGATC 2019401 |||||| |||||||||||| |||||||| ||| Sbjct 86160 CTGCGCTATGCGCGCCTCACGGACGCCCAAATC 86192 >seq302 Length=64523 Score = 89.7 bits (98), Expect = 8e-12 Identities = 193/289 (67%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || | || |||| || || ||||||||||| || |||| ||||| || Sbjct 55853 CTGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGA 55794 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||| || || || || | ||||| || | | || | ||| | || || Sbjct 55793 AGAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACC 55734 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || ||||| | ||| || || || || || ||||||| || || || |||||||| Sbjct 55733 AATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTC 55674 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||| ||||||| || | || |||||||| | | || || | | || || Sbjct 55673 GATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACC 55614 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATG 2073828 || |||||||| || || | || ||| | ||| ||| |||||| Sbjct 55613 AGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATG 55565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916100879600552