Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq666 113 7e-19
seq779 109 9e-18
seq1236 89.7 8e-12
seq302 89.7 8e-12
>seq666
Length=32018
Score = 113 bits (124), Expect = 7e-19
Identities = 317/472 (67%), Gaps = 16/472 (3%)
Strand=Plus/Plus
Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562
|| || |||||||| || ||||| || |||||||| || |||||||| || | |||
Sbjct 19901 GCCAACGCAAAGATTTTCCGCTGATCAACTCCGCCAAATTGCGCGTCGACATCCAAATGC 19960
Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTG--AGCGGCGGGTTGCGGT 2411620
| ||| || | ||||||||||||||||| | ||| ||| ||||||| |||
Sbjct 19961 TCCTCATCCAACGCCTGCATGAGCGGGTATATGAG--CCCTGACAGCGGCGCATTGTCAA 20018
Query 2411621 CCATCTTGACCACCTGGGCGGCGGCCTTTTGCGC--CGTGCCGACGGTCACGCGCGCCG- 2411677
|| ||| || |||| || ||||||||| ||| ||||| | ||||| | ||| |
Sbjct 20019 CCTGCTTCACAACCTCCGCACCGGCCTTTTTCGCATCGTGC--TCAGTCAC-CACGCTGC 20075
Query 2411678 TCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAA 2411737
| || | || ||||| | ||||| |||| ||||||| || ||||| | || |
Sbjct 20076 TGAGTCTGAATAGGTCCATGGTGTATCGGGCGGAGAGCTGGTAGTCACTGCCCAGGACGA 20135
Query 2411738 ATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCGT 2411797
| ||||| || | ||||| ||| | ||| | ||| |||| | | ||
Sbjct 20136 ACTCGAGTTTCTCGATGGGGACATGGATGGCTTCGAGGAGGGCGGTGATTACGTAGCGGT 20195
Query 2411798 ACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCG 2411856
| | |||| |||| | |||||||| || | || ||||||||| | ||
Sbjct 20196 AGTATTCGGC-GCGGTAGTTGACGAGGTTAATGGGTGCTTTCAGGTTGTCGAGGAAGCCG 20254
Query 2411857 TGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTA 2411916
|| | ||| || | |||||| | || | || || || ||||| |||| ||| |||||
Sbjct 20255 TGGATGTCTGCTAGGAGGATTTTGACGTGGCAGCCTGCTTGGAGGAAGTGGGCGAGTTTG 20314
Query 2411917 AAGAT-GGGCACAAAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCC 2411966
| ||| ||||| |||||||| ||| || ||| |||| || | ||||||||
Sbjct 20315 ACGATCGGGCA-GAAGTAGCCGCAG-TGTGGCCTGCCGGTTGTTGCGGTGCC 20364
>seq779
Length=35737
Score = 109 bits (120), Expect = 9e-18
Identities = 93/115 (81%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||||||||||| || || ||||| |||| || || | || ||||||||||| |||||
Sbjct 1989 GCCGCCAACTATCTTGATATCAAAGCCCTGCTAGACGTAGGCTGCAAGACCGTCGCCAAT 1930
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| ||||||||||||||||| || || ||||| |||||||| |||||| || |||
Sbjct 1929 TTGATCAAGGGCAAGTCGCCAGATGATATCCGGAAGACCTTCAACATCCAGAACG 1875
>seq1236
Length=117574
Score = 89.7 bits (98), Expect = 8e-12
Identities = 114/153 (75%), Gaps = 3/153 (2%)
Strand=Plus/Plus
Query 2019250 CGGCGGCCCAGCAGGCCCTCCGATCGA-CCATGGAAAAGTACACCAACACGACGCGGTTT 2019308
||||| ||||||| |||||||| |||| ||||||| | || ||| || || || ||
Sbjct 86042 CGGCG-CCCAGCAAGCCCTCCG-TCGAACCATGGAGATATATTCCACAACCACCCGCTTC 86099
Query 2019309 GCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATC 2019368
|| | |||||||| |||| | |||||||| |||| || || || ||||||
Sbjct 86100 GCATTCGCCTGCAATCAGTCGAATAAAATCATCGAACCCCTGCAATCTCGCTGTGCCATC 86159
Query 2019369 TTGCGCTTTGCGCGCCTCACCGACGCCCAGATC 2019401
|||||| |||||||||||| |||||||| |||
Sbjct 86160 CTGCGCTATGCGCGCCTCACGGACGCCCAAATC 86192
>seq302
Length=64523
Score = 89.7 bits (98), Expect = 8e-12
Identities = 193/289 (67%), Gaps = 0/289 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || | || |||| || || ||||||||||| || |||| ||||| ||
Sbjct 55853 CTGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGA 55794
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||| || || || || | ||||| || | | || | ||| | || ||
Sbjct 55793 AGAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACC 55734
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || ||||| | ||| || || || || || ||||||| || || || ||||||||
Sbjct 55733 AATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTC 55674
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| ||||||| || | || |||||||| | | || || | | || ||
Sbjct 55673 GATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACC 55614
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATG 2073828
|| |||||||| || || | || ||| | ||| ||| ||||||
Sbjct 55613 AGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATG 55565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916100879600552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |