Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq725 127 2e-24
>seq725
Length=19491
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616
|| || |||| ||| | ||| |||| ||| || ||| || || || || || || |||
Sbjct 8855 TGGCCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCC 8796
Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676
| || || ||| ||| ||||| ||||| |||||| | || | | ||||||||||||
Sbjct 8795 GAAAGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGT 8736
Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736
|| ||||| || || ||||| | ||| ||| ||| | || | || || || ||
Sbjct 8735 GGGATACCTTCCTTATCTTGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCA 8676
Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||||| || ||||||||||| || | ||||||||| || || |||||
Sbjct 8675 ACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 8626
Score = 89.7 bits (98), Expect = 4e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||| || || || || || || |||||||||||||| | || |||||||
Sbjct 8078 ACGAAGAACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACC 8019
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || | || ||||| || | |||| | |||||| || || ||||| || || ||
Sbjct 8018 GTCCTCCAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGGAATCCCTTCCTT 7959
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || |||||| | |||||| | || | || ||| || ||||| || ||||
Sbjct 7958 GTCCTG-AATTTTGGACTTGACACTATCGATTGTATCAACCGACTCAACTTCGAGGGTTA 7900
Query 29750 TAGTTTTGCCAGT 29762
|||| || || ||
Sbjct 7899 TAGTCTTTCCGGT 7887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385212777432888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |