Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq583 118 8e-21
>seq583
Length=30596
Score = 118 bits (130), Expect = 8e-21
Identities = 879/1396 (63%), Gaps = 33/1396 (2%)
Strand=Plus/Minus
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
||||| || || || | ||||| |||||||| |||||||| || || | | || ||
Sbjct 3266 ATACCGTTCGCGTCGACGTCAAAGGTGACTTCGATTTGAGGAACGCCACGGGGCGCGGGG 3207
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
||||| || | | || | || || || ||||| || ||| ||||||
Sbjct 3206 GGGATACCGGTTAGCTCGAACTTGCCGAGGAGGTTGTTATCCTTGGTGCGGGCACGTTCA 3147
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620
||||| || | ||||| || | | || || || | | ||| || | | |||
Sbjct 3146 CCCTCAAAGACCTGGATGAGCACGCCTGGCTGGTTGTCGGCA-AAGGTGGAGAACGTCTC 3088
Query 281621 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679
|| || || || || || |||||||| | || | |||||| | ||||| ||
Sbjct 3087 AGACTTCTTGGTGGGGATAGTGGTGTTTCTCTTGATGAGTGGGGTCATGACGCCACCCGC 3028
Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737
|| || | ||| | ||| ||||||| ||| |||| || | || | || | || ||
Sbjct 3027 AGTCTCGATACCGACAGACAGAGGAGCGACGTCAAGGAGAAGGATTTCATTGGTAGACTT 2968
Query 281738 TCA--TCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 281794
| || || | ||| |||||| | || || || | || |||||||||||||||||
Sbjct 2967 GGACGTC-GTGTCGCCAGACAAGA-TGGCGGCCTGGACGGCGGCACCATATGCAACAGCC 2910
Query 281795 TCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGT 281854
|| || || || | | | ||| | | || || ||||| || | || | ||| | |
Sbjct 2909 TCGTCGGGGTTGATGGACTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGATACAAGCT-T 2851
Query 281855 CTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 281913
|| | || ||||| | ||||| || || | || || ||||| || |||||
Sbjct 2850 CTGGATGCGGGGGATACGGGTGGATCCACCCACAAGGACTATCTCATGGACGCTAGATTT 2791
Query 281914 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC 281973
||| | |||| ||| | || ||||| || || | | | || | |||
Sbjct 2790 ATCGATCTTTGCATCGCGGAGCACGCGCTCAACAGGGTCCATGGTGGAGCGGAAGAGGTC 2731
Query 281974 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAA 282033
||||| || ||||| ||| | ||| | | | || ||||||| || ||| |
Sbjct 2730 CTGGCAAAGCTCCTCGAAACGAGCACGAGTGATGGAGGTATAGAAATCAATGCCCTCGTA 2671
Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093
| || || | ||| || | || || | | ||| || || | || || ||||||||
Sbjct 2670 TAGGGAGTCGATTTCGATGGATGTCTGTGCGGCAGAGGAGAGGGTGCGCTTGGCACGTTC 2611
Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC---TGATTGATTCAAATCTGTTTTATA 282150
|| || || | || | || | ||| || ||| ||| | ||| | || |
Sbjct 2610 GCAGGCAGTGCGGAGACGGCGGAGGGCACGAGCATTTGAA-GAT--AGATCCTTCTTGTG 2554
Query 282151 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 282210
|| | |||||| || | ||| | | || || || ||||| ||||| ||||| ||
Sbjct 2553 CTTGCGCTTGAATTCATTGACAAAGTGGTTCACGAGGCGGTTATCGAAATCCTCACCACC 2494
Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270
| | || | || | || | | |||| ||| | || ||||| | || | ||
Sbjct 2493 AAGATGGGTGTCACCAGCAGTGGACTTGACTTCGAAGATGCCCTCTTCGATAGTGAGGAG 2434
Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330
| |||||| ||| |||||||||| || || || || || || ||| ||
Sbjct 2433 GGAGACATCAAAGGTACCACCACCCAAGTCGAAGATGAGAACGTTGCGTTCACCCTCGGC 2374
Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390
|| || ||||||||||| |||| || |||||||| ||||| || ||||| | | ||
Sbjct 2373 CTTCTTGTCAAGACCATAGGCAATGGCGGCAGCAGTGGGTTCGTTGATAATCCGAAGGAC 2314
Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450
||| || ||||| || || ||||| || || ||||| | || |||||||| |||||
Sbjct 2313 ATTCAGGCCAGCGATGAGACCAGCATCCTTGGTAGCTTGACGCTGGGAATCGTTGAAATA 2254
Query 282451 TGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATAAGCGCTTGCTGTTT 282509
|| || ||||||| ||||| | |||| || ||||| || | || ||||
Sbjct 2253 GGCGGGGACAGTAACGACGGCGT-TGTTAACAGTGCCTCCAAGGTAGGACTCGGCAGTTT 2195
Query 282510 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCAT 282569
| |||| || | | | ||| || || |||| || || | | ||||| |||
Sbjct 2194 CTCTCATCTTCGTCAGGACCATGGAGGAGATTTCCTCCGGGGTGAACTGCTTCTCTTCGC 2135
Query 282570 TTTGATATGATACTTCAA--AATATG-GTTTATTACCAACATT---AATAACTTTAAATG 282623
| ||| || |||| | ||| | || || | || ||| || || || |
Sbjct 2134 CCT----TGA-AC-TCAACGGAGATGACTGGCTTTCCCGCCTTGTCAATGACCTTGAAGG 2081
Query 282624 GCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGT 282682
| | | ||||| || ||||| || || || || || | | ||||| | ||
Sbjct 2080 GGAAGTGCTTCATGTCGGATTGGAC-CTCAGGATCGGCGAATTTGCGGCCAATGAGACGC 2022
Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742
|| || ||||| | || |||| || || | || |||||| |||||| ||||| ||
Sbjct 2021 TTGGCGTCAAAGACTGTGTTGGAGGGGTTCATGGCGACTTGATTTTTGGCGGCATCCCCG 1962
Query 282743 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 282802
|||||| | || || ||||| || | ||| | || || || || || ||||| || ||
Sbjct 1961 ATCAGACGCTCGGTGTCTGTGAAGGCAACGAACGAGGGTGTGGTCCGGTTACCCTGGTCG 1902
Query 282803 TTCGCAATAATTTCAA 282818
|| ||||| |||||||
Sbjct 1901 TTGGCAATGATTTCAA 1886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740563236981168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |