Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq583 118 8e-21 >seq583 Length=30596 Score = 118 bits (130), Expect = 8e-21 Identities = 879/1396 (63%), Gaps = 33/1396 (2%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 ||||| || || || | ||||| |||||||| |||||||| || || | | || || Sbjct 3266 ATACCGTTCGCGTCGACGTCAAAGGTGACTTCGATTTGAGGAACGCCACGGGGCGCGGGG 3207 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | || | || || || ||||| || ||| |||||| Sbjct 3206 GGGATACCGGTTAGCTCGAACTTGCCGAGGAGGTTGTTATCCTTGGTGCGGGCACGTTCA 3147 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 ||||| || | ||||| || | | || || || | | ||| || | | ||| Sbjct 3146 CCCTCAAAGACCTGGATGAGCACGCCTGGCTGGTTGTCGGCA-AAGGTGGAGAACGTCTC 3088 Query 281621 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 || || || || || || |||||||| | || | |||||| | ||||| || Sbjct 3087 AGACTTCTTGGTGGGGATAGTGGTGTTTCTCTTGATGAGTGGGGTCATGACGCCACCCGC 3028 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| | ||| ||||||| ||| |||| || | || | || | || || Sbjct 3027 AGTCTCGATACCGACAGACAGAGGAGCGACGTCAAGGAGAAGGATTTCATTGGTAGACTT 2968 Query 281738 TCA--TCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 281794 | || || | ||| |||||| | || || || | || ||||||||||||||||| Sbjct 2967 GGACGTC-GTGTCGCCAGACAAGA-TGGCGGCCTGGACGGCGGCACCATATGCAACAGCC 2910 Query 281795 TCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGT 281854 || || || || | | | ||| | | || || ||||| || | || | ||| | | Sbjct 2909 TCGTCGGGGTTGATGGACTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGATACAAGCT-T 2851 Query 281855 CTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 281913 || | || ||||| | ||||| || || | || || ||||| || ||||| Sbjct 2850 CTGGATGCGGGGGATACGGGTGGATCCACCCACAAGGACTATCTCATGGACGCTAGATTT 2791 Query 281914 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC 281973 ||| | |||| ||| | || ||||| || || | | | || | ||| Sbjct 2790 ATCGATCTTTGCATCGCGGAGCACGCGCTCAACAGGGTCCATGGTGGAGCGGAAGAGGTC 2731 Query 281974 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAA 282033 ||||| || ||||| ||| | ||| | | | || ||||||| || ||| | Sbjct 2730 CTGGCAAAGCTCCTCGAAACGAGCACGAGTGATGGAGGTATAGAAATCAATGCCCTCGTA 2671 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | || || | ||| || | || || | | ||| || || | || || |||||||| Sbjct 2670 TAGGGAGTCGATTTCGATGGATGTCTGTGCGGCAGAGGAGAGGGTGCGCTTGGCACGTTC 2611 Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC---TGATTGATTCAAATCTGTTTTATA 282150 || || || | || | || | ||| || ||| ||| | ||| | || | Sbjct 2610 GCAGGCAGTGCGGAGACGGCGGAGGGCACGAGCATTTGAA-GAT--AGATCCTTCTTGTG 2554 Query 282151 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 282210 || | |||||| || | ||| | | || || || ||||| ||||| ||||| || Sbjct 2553 CTTGCGCTTGAATTCATTGACAAAGTGGTTCACGAGGCGGTTATCGAAATCCTCACCACC 2494 Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270 | | || | || | || | | |||| ||| | || ||||| | || | || Sbjct 2493 AAGATGGGTGTCACCAGCAGTGGACTTGACTTCGAAGATGCCCTCTTCGATAGTGAGGAG 2434 Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 | |||||| ||| |||||||||| || || || || || || ||| || Sbjct 2433 GGAGACATCAAAGGTACCACCACCCAAGTCGAAGATGAGAACGTTGCGTTCACCCTCGGC 2374 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 || || ||||||||||| |||| || |||||||| ||||| || ||||| | | || Sbjct 2373 CTTCTTGTCAAGACCATAGGCAATGGCGGCAGCAGTGGGTTCGTTGATAATCCGAAGGAC 2314 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 ||| || ||||| || || ||||| || || ||||| | || |||||||| ||||| Sbjct 2313 ATTCAGGCCAGCGATGAGACCAGCATCCTTGGTAGCTTGACGCTGGGAATCGTTGAAATA 2254 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATAAGCGCTTGCTGTTT 282509 || || ||||||| ||||| | |||| || ||||| || | || |||| Sbjct 2253 GGCGGGGACAGTAACGACGGCGT-TGTTAACAGTGCCTCCAAGGTAGGACTCGGCAGTTT 2195 Query 282510 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCAT 282569 | |||| || | | | ||| || || |||| || || | | ||||| ||| Sbjct 2194 CTCTCATCTTCGTCAGGACCATGGAGGAGATTTCCTCCGGGGTGAACTGCTTCTCTTCGC 2135 Query 282570 TTTGATATGATACTTCAA--AATATG-GTTTATTACCAACATT---AATAACTTTAAATG 282623 | ||| || |||| | ||| | || || | || ||| || || || | Sbjct 2134 CCT----TGA-AC-TCAACGGAGATGACTGGCTTTCCCGCCTTGTCAATGACCTTGAAGG 2081 Query 282624 GCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGT 282682 | | | ||||| || ||||| || || || || || | | ||||| | || Sbjct 2080 GGAAGTGCTTCATGTCGGATTGGAC-CTCAGGATCGGCGAATTTGCGGCCAATGAGACGC 2022 Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742 || || ||||| | || |||| || || | || |||||| |||||| ||||| || Sbjct 2021 TTGGCGTCAAAGACTGTGTTGGAGGGGTTCATGGCGACTTGATTTTTGGCGGCATCCCCG 1962 Query 282743 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 282802 |||||| | || || ||||| || | ||| | || || || || || ||||| || || Sbjct 1961 ATCAGACGCTCGGTGTCTGTGAAGGCAACGAACGAGGGTGTGGTCCGGTTACCCTGGTCG 1902 Query 282803 TTCGCAATAATTTCAA 282818 || ||||| ||||||| Sbjct 1901 TTGGCAATGATTTCAA 1886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740563236981168