Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq725 111 2e-19 seq639 96.9 3e-15 seq302 82.4 7e-11 >seq725 Length=19491 Score = 111 bits (122), Expect = 2e-19 Identities = 139/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| ||||||||||| | || |||| |||||| |||||||||| Sbjct 8366 GTGGACTCCTTCTGAATATTGTAATCAGAAAGGGT--ACGACCGTCCTCCAGCTGCTTGC 8309 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| ||||| |||||||| || || || || || Sbjct 8308 CGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCTTGTATTTTCGACT 8249 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || |||| | |||||| || | ||||| ||| || ||||| |||| Sbjct 8248 TAACGTTGTCGATGGTATCGGATGACTCCACCTCTAGGGTGATGGTCTTACCGGTGAGAG 8189 Query 133642 TTTTTACGA 133650 |||| |||| Sbjct 8188 TTTTGACGA 8180 Score = 100 bits (110), Expect = 3e-16 Identities = 145/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 |||||||| || || ||||| ||||| | | | | |||| ||||| || || || | Sbjct 8594 GTGGACTCCTTTTGGATATTATAATC--CGAGAGAGTACGACCATCCTCAAGTTGTTTTC 8537 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || |||||||| ||||| ||||||||||| || || ||| ||||| | Sbjct 8536 CGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTATC-TTGAATTTTTGAT 8478 Query 133582 TGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 | | | | |||| ||| || | ||| || || | |||| ||| || |||||||| Sbjct 8477 TTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTCTTTCCGGTCAGG 8418 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| ||||| || ||||| Sbjct 8417 GTTTTAACGAAGATTTGCAT 8398 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| |||||||| || | || ||| | ||||||||||| || || || Sbjct 8817 CTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCA-TCCTCGAGCTGTTTACCAGCAA 8759 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC- 133586 | || || || ||||| || || ||||| |||||||| || ||| ||| | || | | Sbjct 8758 AGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGGAT-TTTAGATTTAACA 8700 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | |||| || |||| | ||| || || | || | |||||||||||||| ||||| Sbjct 8699 TTATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTA 8640 Query 133647 ACGAAAATCTGCATG 133661 ||||| || |||||| Sbjct 8639 ACGAAGATTTGCATG 8625 >seq639 Length=25736 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530 ||||| ||||| ||||| | | ||| || || ||||||||||||||||| ||| | | Sbjct 21815 TTCTGGATATTATAATCACTTAGCGTTCGGCCG--TCCTCGAGCTGCTTGCCAGCGAAGA 21872 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | | |||||||| ||||| ||||| || |||||||| || || ||| | | | Sbjct 21873 TCAATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGT 21932 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | || ||| ||| ||| || |||| ||||| ||| ||||| || || || || |||| Sbjct 21933 CGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 21992 Query 133651 A 133651 | Sbjct 21993 A 21993 >seq302 Length=64523 Score = 82.4 bits (90), Expect = 7e-11 Identities = 203/307 (66%), Gaps = 6/307 (2%) Strand=Plus/Minus Query 149472 TAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGA 149531 || ||||||||||||||||| |||||| | || ||||||||| ||| || || Sbjct 55684 TAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGC 55625 Query 149532 AAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATC 149591 | || || || ||| | ||| || ||| || || || || || || ||| Sbjct 55624 TGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATG 55565 Query 149592 ATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGC 149651 | | || | ||| | || | |||| |||||| || ||||| || || || || ||| Sbjct 55564 AGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGC 55505 Query 149652 ATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCA---ATTTTGAGCAAGTAGCCG 149708 || | ||| ||||| || ||||| || || ||| ||| ||| |||||||| Sbjct 55504 ATAATCATGTGCTGTGGGCGCTCTGCAACCTTG---CCATTGATTCGAAGCAAGTAAGAC 55448 Query 149709 TTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 | || || |||||| | || || || | ||||| |||||||| ||| |||| || Sbjct 55447 CTCTCCAGGGTCTTGAATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCT 55388 Query 149769 GCGTCGA 149775 | || || Sbjct 55387 GAGTTGA 55381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483412533504320