Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq302 154 3e-32 >seq302 Length=64523 Score = 154 bits (170), Expect = 3e-32 Identities = 449/691 (65%), Gaps = 3/691 (0%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||| || ||||| || || || | |||| || ||||| |||||||| || | Sbjct 55422 TATTTCGGATTCAAGACCCTGGAGAGGTCTTACTTGCTTCGAATCAATGGCAAGGTTGCA 55481 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || || || || |||||| || | |||||||| ||||| || || ||| |||| | || Sbjct 55482 GAGCGCCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAA 55541 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || ||||| ||| | | | ||||| | | |||||| |||||||| Sbjct 55542 AGAGTCATTGAGACATATAACCTCATGTCGCAAAAGTACTTCACTCATGCCTCTCCTACC 55601 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 || || ||||| || ||| || |||| || ||||| || | | || || Sbjct 55602 CTCTTCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAG 55661 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAAC 110603 || || || || || |||||||| | || ||| |||||| ||||| || | | Sbjct 55662 GAAGACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACC 55721 Query 110604 TCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACA 110663 | || || |||||| || || |||| || || | || | | || || | Sbjct 55722 GCCGGTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTGGTTCCTACATTGCTGGA 55781 Query 110664 GCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAA 110723 |||| || |||||| ||| ||||||| ||| | | || ||||| ||||||| | | Sbjct 55782 ACGAATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGA 55841 Query 110724 TATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGG 110780 || || | || || ||||| | | || | ||||| ||||| || || || ||| Sbjct 55842 TACGTCGACCAGGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCCATGG 55901 Query 110781 CATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGA 110840 ||| ||||| ||||||||||| || || || ||||| || || |||||| | Sbjct 55902 CATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTCGT 55961 Query 110841 GCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAA 110900 || |||||| |||| |||| | |||| | ||| |||| |||||||| ||| | | Sbjct 55962 GCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAG 56021 Query 110901 AATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGA 110960 ||||| ||| |||| | ||||| || | || || | | ||||| ||||| Sbjct 56022 AATGGTGAATGGACTCTGTTCTGTCCAAATGAAGCACCAGGCTTGGCGGATGTCTATGGT 56081 Query 110961 AAAGAGTTTGAAGACCTTTACGAAAAATATG 110991 | ||||| || | ||||| || || |||| Sbjct 56082 GATGAGTTCGAGGCTCTTTATGAGAAGTATG 56112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186791998138648