Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq537 107 3e-17 seq302 102 1e-15 seq1236 96.9 5e-14 >seq537 Length=102077 Score = 107 bits (118), Expect = 3e-17 Identities = 209/304 (69%), Gaps = 15/304 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| | |||| | ||||| || ||||||||||| || || || || | Sbjct 34371 GATCTGGCAAATGTACAAGAAAG-CAGAGGCATCGTTTTGGACCGCAGAAGAAGTTGATC 34429 Query 1455835 TCGGCGCCGACACGGTCCAC-TGGGTGTCGC-------TGAGCGACGACGAGCGCCATTT 1455886 || ||| | | || | || || | ||| || |||||||| | || Sbjct 34430 TCT----CGAAA-GATCTTCATGACTGGAACAATAGATTGAATGATGACGAGCGATACTT 34484 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| |||||| | || || || |||||| ||||| || || |||||||| | Sbjct 34485 CATCTCACACGTCTTGGCATTCTT-CGCCGCGTCGGATGGAATTGTCAATGAGAACCTCG 34543 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 || || || | ||| ||||| | || ||||| || | || ||||| ||||||| Sbjct 34544 TCGAGCGTTTCAGCGGAGAAGTCCAGGTCCCTGAGGCCCGATGCTTCTACGGTTTCCAGA 34603 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || |||||||||||||| ||||| ||||| || || ||||| || || |||||| Sbjct 34604 TCATGATGGAAAACATCCACTCCGAAACTTACTCCCTTCTCATCGATACGTATATCAAGG 34663 Query 1456067 ACCC 1456070 | || Sbjct 34664 AACC 34667 >seq302 Length=64523 Score = 102 bits (112), Expect = 1e-15 Identities = 198/290 (68%), Gaps = 2/290 (1%) Strand=Plus/Plus Query 259894 CATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952 ||||||||| ||| ||||| ||| || | || || ||||| || || || || || | Sbjct 55565 CATGTCGCAAAAGTACTTCAC-TCATGCCTCTCCTACCCTCTTCAACGCTGGTACTCCCC 55623 Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012 || |||| | |||||||| || | || ||||||| || ||||||||||| | Sbjct 55624 AGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAGACAGCATCGAGGGCATTT 55683 Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 ||||||| || || || || || || || ||| | ||||| || || ||| || | Sbjct 55684 ATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCGGTGGTATTGGTCTTAACA 55743 Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132 ||| | || | | || ||||| | || || || || ||| || ||||| Sbjct 55744 TTCACCGCATCCGTGGTACTGGTTCCTACATTGCTGGAACGAATGGCTCTTCAAACGGAA 55803 Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 |||| || ||||| |||||||| || |||| || | |||||||||||| Sbjct 55804 TTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACGTCGACCAG 55853 >seq1236 Length=117574 Score = 96.9 bits (106), Expect = 5e-14 Identities = 116/154 (75%), Gaps = 3/154 (2%) Strand=Plus/Minus Query 332848 GATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTC 332907 |||||||||||| ||||||||| || |||||||||||||||| || ||||||| || Sbjct 86192 GATTTGGGCGTCCGTGAGGCGCGCATAGCGCAGGATGGCACAGCGAGATTGCAGGGGTTC 86133 Query 332908 GATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTC 332967 ||||| | |||| |||||||| | || || || || || ||| || | || Sbjct 86132 GATGATTTTATTCGACTGATTGCAGGCGAATGCGAAGCGGGTGGTTGTGGAATATATCTC 86073 Query 332968 CATGG-TCGACCGGAGGGCCTGTTGGGCCGCCGG 333000 ||||| |||| |||||||| || |||| |||||| Sbjct 86072 CATGGTTCGA-CGGAGGGCTTGCTGGG-CGCCGG 86041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177679253885616