Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq537 107 3e-17
seq302 102 1e-15
seq1236 96.9 5e-14
>seq537
Length=102077
Score = 107 bits (118), Expect = 3e-17
Identities = 209/304 (69%), Gaps = 15/304 (5%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| | |||| | ||||| || ||||||||||| || || || || |
Sbjct 34371 GATCTGGCAAATGTACAAGAAAG-CAGAGGCATCGTTTTGGACCGCAGAAGAAGTTGATC 34429
Query 1455835 TCGGCGCCGACACGGTCCAC-TGGGTGTCGC-------TGAGCGACGACGAGCGCCATTT 1455886
|| ||| | | || | || || | ||| || |||||||| | ||
Sbjct 34430 TCT----CGAAA-GATCTTCATGACTGGAACAATAGATTGAATGATGACGAGCGATACTT 34484
Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946
|||| |||||| | || || || |||||| ||||| || || |||||||| |
Sbjct 34485 CATCTCACACGTCTTGGCATTCTT-CGCCGCGTCGGATGGAATTGTCAATGAGAACCTCG 34543
Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006
|| || || | ||| ||||| | || ||||| || | || ||||| |||||||
Sbjct 34544 TCGAGCGTTTCAGCGGAGAAGTCCAGGTCCCTGAGGCCCGATGCTTCTACGGTTTCCAGA 34603
Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066
|| || |||||||||||||| ||||| ||||| || || ||||| || || ||||||
Sbjct 34604 TCATGATGGAAAACATCCACTCCGAAACTTACTCCCTTCTCATCGATACGTATATCAAGG 34663
Query 1456067 ACCC 1456070
| ||
Sbjct 34664 AACC 34667
>seq302
Length=64523
Score = 102 bits (112), Expect = 1e-15
Identities = 198/290 (68%), Gaps = 2/290 (1%)
Strand=Plus/Plus
Query 259894 CATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952
||||||||| ||| ||||| ||| || | || || ||||| || || || || || |
Sbjct 55565 CATGTCGCAAAAGTACTTCAC-TCATGCCTCTCCTACCCTCTTCAACGCTGGTACTCCCC 55623
Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012
|| |||| | |||||||| || | || ||||||| || ||||||||||| |
Sbjct 55624 AGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAGACAGCATCGAGGGCATTT 55683
Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072
||||||| || || || || || || || ||| | ||||| || || ||| || |
Sbjct 55684 ATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCGGTGGTATTGGTCTTAACA 55743
Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132
||| | || | | || ||||| | || || || || ||| || |||||
Sbjct 55744 TTCACCGCATCCGTGGTACTGGTTCCTACATTGCTGGAACGAATGGCTCTTCAAACGGAA 55803
Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|||| || ||||| |||||||| || |||| || | ||||||||||||
Sbjct 55804 TTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACGTCGACCAG 55853
>seq1236
Length=117574
Score = 96.9 bits (106), Expect = 5e-14
Identities = 116/154 (75%), Gaps = 3/154 (2%)
Strand=Plus/Minus
Query 332848 GATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTC 332907
|||||||||||| ||||||||| || |||||||||||||||| || ||||||| ||
Sbjct 86192 GATTTGGGCGTCCGTGAGGCGCGCATAGCGCAGGATGGCACAGCGAGATTGCAGGGGTTC 86133
Query 332908 GATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTC 332967
||||| | |||| |||||||| | || || || || || ||| || | ||
Sbjct 86132 GATGATTTTATTCGACTGATTGCAGGCGAATGCGAAGCGGGTGGTTGTGGAATATATCTC 86073
Query 332968 CATGG-TCGACCGGAGGGCCTGTTGGGCCGCCGG 333000
||||| |||| |||||||| || |||| ||||||
Sbjct 86072 CATGGTTCGA-CGGAGGGCTTGCTGGG-CGCCGG 86041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177679253885616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |