Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq302 168 8e-37
seq432 122 1e-22
>seq302
Length=64523
Score = 168 bits (186), Expect = 8e-37
Identities = 574/878 (65%), Gaps = 20/878 (2%)
Strand=Plus/Minus
Query 110552 TTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGA 110611
|||||||| | |||||||| | || || |||||||| || || | | || ||
Sbjct 57082 TTGATATCCTGTGGGATATTGGGAATGTTTTGGATGGAGCCTCCATCTGCAATAATTCGA 57023
Query 110612 TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTG 110671
| |||||| | | |||||||||||| | | | ||||| || | || | ||||
Sbjct 57022 TTCTTCATGTTGTCGGACCAGAGACCCAAGTCCACCAGGTCCTTCAAAAGCCACGGGTTG 56963
Query 110672 ACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCA 110731
||||| ||||| ||||| ||| | | | |||||| || | ||||| |||||
Sbjct 56962 ACAATTTGGAACTCGCCTGCAAGGACACGGCGCGAGTAGATATTAGAGGTGTAAGGTTCG 56903
Query 110732 AAGCATTCATTATTACCCAAGATTTGTGCG-GTGGAGGCTGTTGGCATTGGTGCCATCAA 110790
|||||||| || | |||||| | || ||| ||| || ||||| || || | |
Sbjct 56902 AAGCATTCGTTGA-ATCCAAGAATCTGGCTAGTGCTGGCAGTAGGCATGGGAGCAACAAG 56844
Query 110791 AAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTT 110850
| |||||| || | || | || ||| | || ||| |||||| || ||
Sbjct 56843 CAAACTGTTGCGGACTCCATGCTTAGCGATCTCCTGTTTCAGAGAATCCCAATCCCAGA- 56785
Query 110851 GAGC--TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAA 110908
|| | | || | || ||||||| ||| ||||||| | || || || | ||||||
Sbjct 56784 GATCGGTGGGAGTGACAC-CCCACATATCATACTGAAGGATGCCCTGTGAGACTGGAGAA 56726
Query 110909 CCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGAT 110968
|| ||| | | ||| | || | | | ||| | |||||| ||| || |
Sbjct 56725 CCTTCATATGAGGAATATGGGCCGTCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAG 56666
Query 110969 GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT 111028
||||| || || |||||||| || || ||||| || |||||||||| |||||||||
Sbjct 56665 GCGTGGTAAATTGTTTCAAAAATTTGAATATTCAACTGCTTGGCTTCAGGGGAATCAAAT 56606
Query 111029 GCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCT 111087
| | || ||| | | || |||| || ||||| |||||||| | |||| || |
Sbjct 56605 G-GAAGTCGCAAAGCGAGGAAAGCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCG 56547
Query 111088 GTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTC 111146
|| || | || | || | || ||| || ||||| | |||| ||| |||| ||
Sbjct 56546 ATGGCGGAAGTTGCTTCGTTTG-GCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTC 56488
Query 111147 GGTTTAGATTTTTGGTAACAAT--CTTT-GTGATTTCATGAAGTTTTTCATAATCAAAAG 111203
||| || || | ||| | ||| || | ||| || || || || ||||| |
Sbjct 56487 TGTTAAGGTT---GCGAACGACGACTTGAGTTACTTCGTGGAGCTTGCCAAAATCATATT 56431
Query 111204 TGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCG 111263
| | | | ||| || | | || | ||| || || ||||| || ||||||||
Sbjct 56430 CTCCACGCACAGCATCCACGAAGGTAGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAA 56371
Query 111264 TCTCATCC--TTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGT 111321
||||| | | | || | || | || || || |||| ||||| || |||| ||
Sbjct 56370 CTTCATCAGGTGAGCAGTAT--TCGATGATCTCGGTGCATAGATTGGAGCTTCTAATAGT 56313
Query 111322 CCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 111381
||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||| |
Sbjct 56312 CCCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTT 56253
Query 111382 CCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA 111419
|| ||||| || || | | ||||||||| | |||||
Sbjct 56252 ACCAGTCTCAGTTTGAGCCTCGAGAATAGCATACCAAA 56215
Score = 127 bits (140), Expect = 3e-24
Identities = 378/580 (65%), Gaps = 11/580 (2%)
Strand=Plus/Minus
Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571
|||||||| | | ||||||||| |||| ||||| |||| | |||||| || |||||
Sbjct 56062 CCTGGTGCTTCATTTGGACAGAACAGAGTCCATTCACCATTCTTCTCAACGCGTTTCATA 56003
Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 111631
|| || || || |||| || | || ||||| | | ||| | ||||| | ||
Sbjct 56002 AATAGATCAGGTGTCCAAAGTGCAAGGAATAGATCACGAGCACGAACTTCTTCCTTGCCG 55943
Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691
||||| || | || | ||| || | |||||| |||||||||||||| ||||
Sbjct 55942 TGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGCTCAAGGTAGATG 55883
Query 111692 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 111745
|| | | ||| | | ||| || | || | || || | || ||| ||
Sbjct 55882 GCAAACGCTCC---TGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGCAGTGTTATTG 55826
Query 111746 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 111805
|| ||||| ||||| |||| ||| || | ||| ||||| || || ||| ||
Sbjct 55825 AAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCAATGTAGGAA 55766
Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865
| | | | | || |||| | |||||||| || || |||||| ||| |
Sbjct 55765 CCAGTACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTTGAAATTAGA 55706
Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925
||||| | || || |||| || || | ||| ||| ||||| | | || |||
Sbjct 55705 GCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGG 55646
Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985
||||| || |||||| || || |||||||| ||||||||||| || | || |||
Sbjct 55645 AAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGA 55586
Query 111986 ATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044
|||| ||| ||| ||||| || |||||||| | ||| || | ||| || ||
Sbjct 55585 GTGAA-GTACTTTTGCGACATGAGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCC 55527
Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084
|||||| || || || || ||||| | ||||| |||||||
Sbjct 55526 GTGGATCCCAATAGCAACACGCATAATCATGTGCTGTGGG 55487
>seq432
Length=131617
Score = 122 bits (134), Expect = 1e-22
Identities = 332/501 (66%), Gaps = 27/501 (5%)
Strand=Plus/Plus
Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512
||||| ||||| || || | | || | ||| |||||||| || ||||| || | ||
Sbjct 105109 TCAAATCGACCAGGTCGCAACAACGCCTTATCTAGGATATCGACTCGATTGGTTCCAGCC 105168
Query 11513 ATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATT 11572
| |||||||| | | ||| ||||||||||| ||||| || | ||||| | |
Sbjct 105169 AGAACCACAACTTGATCCGAGGTGTTGAAGCCATCCATTTCGGTCAGGATCTGATTCAAT 105228
Query 11573 GTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCA-----CTGCGTTG----CTTG 11623
|| || | |||||||||| | ||||||| | || || | |||
Sbjct 105229 GTGCTCTCGCGCTCATCATTTCC------ACCACCATAAGCGTTCTTCGATCTCGACTTT 105282
Query 11624 CCCACCGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATTTC 11682
|| | |||||||||||||||||||| | |||||| ||| || ||||| |||||| || |
Sbjct 105283 CCAATAGCATCAATCTCATCAATGAATATAATACAAGGTGTGTTTTTC-CGGGCGGTTGC 105341
Query 11683 AAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CG 11740
||| ||||| || || | || || || |||||||||||||| || || | | |
Sbjct 105342 AAACAGATCACGGACTCGGGAGGGGCCAACGCCAACAAACATCTCGACGAACTCAGACCC 105401
Query 11741 GCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11800
|| | | ||| | ||||| || ||| || || || | || || || | |||
Sbjct 105402 GC-TAACGCTGTA-AAATGGAACGCCTGACTCGCCAGCTGTAGCCTTTGCTAGCAACGTC 105459
Query 11801 TTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA---CTT 11857
|| || ||||| || || | |||| || |||| |||||||||||||||| | |
Sbjct 105460 TTACCGGTACCCGGTGGCCCTGAAAGAATAGCACCTCTGGGGATCTTGGCACCAAGCCGT 105519
Query 11858 CCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCC 11917
||| | ||| |||| ||| ||||| |||| || || ||| | ||||||
Sbjct 105520 TGAAACT---GCTCCGGTTTCTTAAGAAAGCTGACAAATTCCATAATCTCAACCTTGGCC 105576
Query 11918 GCGTCAATCCCCTCAACATCA 11938
|||| || || | ||||||
Sbjct 105577 TCGTCCATACCGGCTACATCA 105597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628021260652800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |