Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq302 168 8e-37 seq432 122 1e-22 >seq302 Length=64523 Score = 168 bits (186), Expect = 8e-37 Identities = 574/878 (65%), Gaps = 20/878 (2%) Strand=Plus/Minus Query 110552 TTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGA 110611 |||||||| | |||||||| | || || |||||||| || || | | || || Sbjct 57082 TTGATATCCTGTGGGATATTGGGAATGTTTTGGATGGAGCCTCCATCTGCAATAATTCGA 57023 Query 110612 TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTG 110671 | |||||| | | |||||||||||| | | | ||||| || | || | |||| Sbjct 57022 TTCTTCATGTTGTCGGACCAGAGACCCAAGTCCACCAGGTCCTTCAAAAGCCACGGGTTG 56963 Query 110672 ACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCA 110731 ||||| ||||| ||||| ||| | | | |||||| || | ||||| ||||| Sbjct 56962 ACAATTTGGAACTCGCCTGCAAGGACACGGCGCGAGTAGATATTAGAGGTGTAAGGTTCG 56903 Query 110732 AAGCATTCATTATTACCCAAGATTTGTGCG-GTGGAGGCTGTTGGCATTGGTGCCATCAA 110790 |||||||| || | |||||| | || ||| ||| || ||||| || || | | Sbjct 56902 AAGCATTCGTTGA-ATCCAAGAATCTGGCTAGTGCTGGCAGTAGGCATGGGAGCAACAAG 56844 Query 110791 AAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTT 110850 | |||||| || | || | || ||| | || ||| |||||| || || Sbjct 56843 CAAACTGTTGCGGACTCCATGCTTAGCGATCTCCTGTTTCAGAGAATCCCAATCCCAGA- 56785 Query 110851 GAGC--TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAA 110908 || | | || | || ||||||| ||| ||||||| | || || || | |||||| Sbjct 56784 GATCGGTGGGAGTGACAC-CCCACATATCATACTGAAGGATGCCCTGTGAGACTGGAGAA 56726 Query 110909 CCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGAT 110968 || ||| | | ||| | || | | | ||| | |||||| ||| || | Sbjct 56725 CCTTCATATGAGGAATATGGGCCGTCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAG 56666 Query 110969 GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT 111028 ||||| || || |||||||| || || ||||| || |||||||||| ||||||||| Sbjct 56665 GCGTGGTAAATTGTTTCAAAAATTTGAATATTCAACTGCTTGGCTTCAGGGGAATCAAAT 56606 Query 111029 GCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCT 111087 | | || ||| | | || |||| || ||||| |||||||| | |||| || | Sbjct 56605 G-GAAGTCGCAAAGCGAGGAAAGCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCG 56547 Query 111088 GTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTC 111146 || || | || | || | || ||| || ||||| | |||| ||| |||| || Sbjct 56546 ATGGCGGAAGTTGCTTCGTTTG-GCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTC 56488 Query 111147 GGTTTAGATTTTTGGTAACAAT--CTTT-GTGATTTCATGAAGTTTTTCATAATCAAAAG 111203 ||| || || | ||| | ||| || | ||| || || || || ||||| | Sbjct 56487 TGTTAAGGTT---GCGAACGACGACTTGAGTTACTTCGTGGAGCTTGCCAAAATCATATT 56431 Query 111204 TGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCG 111263 | | | | ||| || | | || | ||| || || ||||| || |||||||| Sbjct 56430 CTCCACGCACAGCATCCACGAAGGTAGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAA 56371 Query 111264 TCTCATCC--TTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGT 111321 ||||| | | | || | || | || || || |||| ||||| || |||| || Sbjct 56370 CTTCATCAGGTGAGCAGTAT--TCGATGATCTCGGTGCATAGATTGGAGCTTCTAATAGT 56313 Query 111322 CCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 111381 ||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||| | Sbjct 56312 CCCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTT 56253 Query 111382 CCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA 111419 || ||||| || || | | ||||||||| | ||||| Sbjct 56252 ACCAGTCTCAGTTTGAGCCTCGAGAATAGCATACCAAA 56215 Score = 127 bits (140), Expect = 3e-24 Identities = 378/580 (65%), Gaps = 11/580 (2%) Strand=Plus/Minus Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571 |||||||| | | ||||||||| |||| ||||| |||| | |||||| || ||||| Sbjct 56062 CCTGGTGCTTCATTTGGACAGAACAGAGTCCATTCACCATTCTTCTCAACGCGTTTCATA 56003 Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 111631 || || || || |||| || | || ||||| | | ||| | ||||| | || Sbjct 56002 AATAGATCAGGTGTCCAAAGTGCAAGGAATAGATCACGAGCACGAACTTCTTCCTTGCCG 55943 Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691 ||||| || | || | ||| || | |||||| |||||||||||||| |||| Sbjct 55942 TGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGCTCAAGGTAGATG 55883 Query 111692 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 111745 || | | ||| | | ||| || | || | || || | || ||| || Sbjct 55882 GCAAACGCTCC---TGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGCAGTGTTATTG 55826 Query 111746 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 111805 || ||||| ||||| |||| ||| || | ||| ||||| || || ||| || Sbjct 55825 AAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCAATGTAGGAA 55766 Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865 | | | | | || |||| | |||||||| || || |||||| ||| | Sbjct 55765 CCAGTACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTTGAAATTAGA 55706 Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925 ||||| | || || |||| || || | ||| ||| ||||| | | || ||| Sbjct 55705 GCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGG 55646 Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985 ||||| || |||||| || || |||||||| ||||||||||| || | || ||| Sbjct 55645 AAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGA 55586 Query 111986 ATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044 |||| ||| ||| ||||| || |||||||| | ||| || | ||| || || Sbjct 55585 GTGAA-GTACTTTTGCGACATGAGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCC 55527 Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 |||||| || || || || ||||| | ||||| ||||||| Sbjct 55526 GTGGATCCCAATAGCAACACGCATAATCATGTGCTGTGGG 55487 >seq432 Length=131617 Score = 122 bits (134), Expect = 1e-22 Identities = 332/501 (66%), Gaps = 27/501 (5%) Strand=Plus/Plus Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512 ||||| ||||| || || | | || | ||| |||||||| || ||||| || | || Sbjct 105109 TCAAATCGACCAGGTCGCAACAACGCCTTATCTAGGATATCGACTCGATTGGTTCCAGCC 105168 Query 11513 ATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATT 11572 | |||||||| | | ||| ||||||||||| ||||| || | ||||| | | Sbjct 105169 AGAACCACAACTTGATCCGAGGTGTTGAAGCCATCCATTTCGGTCAGGATCTGATTCAAT 105228 Query 11573 GTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCA-----CTGCGTTG----CTTG 11623 || || | |||||||||| | ||||||| | || || | ||| Sbjct 105229 GTGCTCTCGCGCTCATCATTTCC------ACCACCATAAGCGTTCTTCGATCTCGACTTT 105282 Query 11624 CCCACCGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATTTC 11682 || | |||||||||||||||||||| | |||||| ||| || ||||| |||||| || | Sbjct 105283 CCAATAGCATCAATCTCATCAATGAATATAATACAAGGTGTGTTTTTC-CGGGCGGTTGC 105341 Query 11683 AAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CG 11740 ||| ||||| || || | || || || |||||||||||||| || || | | | Sbjct 105342 AAACAGATCACGGACTCGGGAGGGGCCAACGCCAACAAACATCTCGACGAACTCAGACCC 105401 Query 11741 GCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11800 || | | ||| | ||||| || ||| || || || | || || || | ||| Sbjct 105402 GC-TAACGCTGTA-AAATGGAACGCCTGACTCGCCAGCTGTAGCCTTTGCTAGCAACGTC 105459 Query 11801 TTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA---CTT 11857 || || ||||| || || | |||| || |||| |||||||||||||||| | | Sbjct 105460 TTACCGGTACCCGGTGGCCCTGAAAGAATAGCACCTCTGGGGATCTTGGCACCAAGCCGT 105519 Query 11858 CCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCC 11917 ||| | ||| |||| ||| ||||| |||| || || ||| | |||||| Sbjct 105520 TGAAACT---GCTCCGGTTTCTTAAGAAAGCTGACAAATTCCATAATCTCAACCTTGGCC 105576 Query 11918 GCGTCAATCCCCTCAACATCA 11938 |||| || || | |||||| Sbjct 105577 TCGTCCATACCGGCTACATCA 105597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628021260652800