Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq302 158 1e-33 >seq302 Length=64523 Score = 158 bits (174), Expect = 1e-33 Identities = 628/972 (65%), Gaps = 36/972 (4%) Strand=Plus/Minus Query 117938 TTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT 117997 ||| ||||| ||||||||| || ||||| || ||||| | || || || ||| || Sbjct 57170 TTGAGATTGGTCGATGAAGGCACCTCGATCGGCAGCCATCTGAA-CA-ATGGTTCG-CTG 57114 Query 117998 ---GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATT 118054 ||||||||| || || |||| || || ||||| | |||||||| || || Sbjct 57113 AGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTT 57054 Query 118055 TTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAAT 118114 ||||||||| || || | | || ||| |||||| | | ||||||||||| | Sbjct 57053 TTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAA 56994 Query 118115 CTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 118174 | || |||| || || | ||||||| ||||| || || ||| || Sbjct 56993 GTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACG 56934 Query 118175 TCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 118234 | | |||||||| | ||||| || || ||||| || ||| | |||||| | ||| Sbjct 56933 GCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGC 56875 Query 118235 T-GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAA 118293 | ||| ||| || |||||||| || | || | ||||| |||| || | | || Sbjct 56874 TAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGGACTCCATGCT---TAG 56818 Query 118294 TGCGTTCCT---TGAGAGCGTCCCAGTCGTAGTTGAGCTTTG----TCTCCCCCTGCCAC 118346 | |||| | |||| ||||| || || || | || | | ||| ||| Sbjct 56817 CGATCTCCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACACCC---CAC 56762 Query 118347 ATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCC 118406 |||||| |||| ||||| || || || |||| || || ||| ||| ||||||||| Sbjct 56761 ATATCATACTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCG 56702 Query 118407 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATG 118466 ||||||| || | || || ||| | ||||| || |||||||||||||| Sbjct 56701 TCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATT 56642 Query 118467 CGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA---ATAAAT 118523 || ||||| |||||| || ||||||||| | ||||| |||| | || Sbjct 56641 TGAATATTCAACTGCTTGGCTTCAGGGGAATCAAATGGAAGTCG---CAAAGCGAGGAAA 56585 Query 118524 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTC--C 118581 |||| || ||||| || |||||| | ||||||||||||| | | || |||| Sbjct 56584 GCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTT--GCTTCGTT 56527 Query 118582 GAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAA 118641 || ||| || ||||| | || | ||||| | || || || || ||| | Sbjct 56526 TGGCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTTGCGAACGACGA 56467 Query 118642 CCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACT 118701 | | || | ||| || ||||| | ||||| | | | | | ||| || | Sbjct 56466 CTTGAGTTACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGG 56407 Query 118702 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTC 118759 |||| | ||| || || |||| ||||| |||| ||||| | | || ||| || Sbjct 56406 TAGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCA--GTATTC 56349 Query 118760 TATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 118819 || || || ||||| | || || || |||| || |||| ||||||||| || ||| Sbjct 56348 GATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTT 56289 Query 118820 TGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 118879 |||| || ||||||||||| ||||| | || | || ||||| ||||| | || ||| Sbjct 56288 CTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAG 56229 Query 118880 AATAGCCTTCCA 118891 |||||| | ||| Sbjct 56228 AATAGCATACCA 56217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618424624758080