Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq302 178 2e-39
seq537 129 7e-25
>seq302
Length=64523
Score = 178 bits (196), Expect = 2e-39
Identities = 634/966 (66%), Gaps = 24/966 (2%)
Strand=Plus/Plus
Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947
||| | ||||||||| || ||||||| |||||||||| || | ||||| ||||| ||
Sbjct 56217 TGGTATGCTATTCTCGAGGCTCAAACTGAGACTGGTAACCCCTTTATGCTCTACAAGGAT 56276
Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007
|| || ||| | ||||| || |||||||| |||| || | || |||||||| ||
Sbjct 56277 GCTTGCAACAAGAAGAGCAACCAAAAGAACCTGGGGACTATTAGAAGCTCCAATCTATGC 56336
Query 105008 ACAGAAATCTTGGAATT-TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 105066
|| || ||| | |||| | | || ||||| ||||| |||||| | || || ||
Sbjct 56337 ACCGAGATCATCGAATACTGCTCACCT-GATGAAGTTGCTGTTTGTAACTTGGCTTCCAT 56395
Query 105067 CGCTCTCCCCAAGTATGTGGATCCAGAGACAA-AGACATTTGATTATGAAAAACTCCACG 105125
|| | || | | |||||| | | | ||| || ||||| || || |||||||
Sbjct 56396 TGCCTTACCTACCTTCGTGGATGCTGTGCGTGGAGA-ATATGATTTTGGCAAGCTCCACG 56454
Query 105126 AAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG 105185
|||| || || ||| ||||| |||||| | || || |||| | || || |
Sbjct 56455 AAGTAACTCAAGTCGTCGTTCGCAACCTTAACAGAATCATCGACCGAAACTACTATCCAG 56514
Query 105186 TTGAGACTGCTCGTA--AATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGG 105243
| ||| || | | || | || | | || || ||||||| ||||||||||||
Sbjct 56515 TCGAGGAAGC-CAAACGAAGC-AACTTCCGCCATCGCCCAATTGCCTGCGGTGTTCAGGG 56572
Query 105244 TCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 105302
||| || |||| ||| | ||||| || | ||||||||||| ||||| ||| |
Sbjct 56573 TCTTGCTGATGCTTTCCTCGCTTTG-CGACTTCCATTTGATTCCCCTGAAGCCAAGCAGT 56631
Query 105303 TCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GGCGAGTTCAGAGTTG 105361
| ||| | || ||||| || || || |||||| | |||| ||| | ||| |
Sbjct 56632 TGAATATTCAAATTTTTGAAACAATTTACCACGCCTGT-TTGACTGCGTCCTGTGAGCTA 56690
Query 105362 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT 105421
|| ||||||| || |||||| | | ||| |||||||||| ||||| || | |||
Sbjct 56691 GCTAAGGTTGACGGCCCATATTCCTCATATGAAGGTTCTCCAGTCTCACAGGGCATCCTT 56750
Query 105422 CAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGA 105480
|| | ||||||||||| || | || | | || || || ||||| |||| || |
Sbjct 56751 CAGTATGATATGTGGG-GTGTCACTCCCACCGATCTCTGGGATTGGGATTCTCTGAAACA 56809
Query 105481 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTC 105540
||| || | || | || |||||| | || | ||||| ||||| || |||
Sbjct 56810 GGAGATCGCTAAGCATGGAGTCCGCAACAGTTTGCTTGTTGCTCCCATGCCTACTGCCAG 56869
Query 105541 CAC-CGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATC 105599
||| || | |||||| | || |||||||| ||||| ||||| | || |||||
Sbjct 56870 CACTAGCCAGATTCTTGGAT-TCAACGAATGCTTCGAACCTTACACCTCTAATATCTACT 56928
Query 105600 TGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCA 105659
| | | ||| || || ||||| ||||||||| | || || | |||||
Sbjct 56929 CGCGCCGTGTCCTTGCAGGCGAGTTCCAAATTGTCAACCCGTGGCTTTTGAAGGACCTGG 56988
Query 105660 AAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCA 105719
|| | |||||||||||| | | |||||| ||| || | || || || ||||
Sbjct 56989 TGGACTTGGGTCTCTGGTCCGACAACATGAAGAATCGAATTATTGCAGATGGAGGCTCCA 57048
Query 105720 TTCAAAATATTGTGGATATTCCAAATGAAAT-TAAGAAGTTGTACCGCACAGTTTGGGAA 105778
| ||||| ||| |||| ||| | || || ||| | || ||| || || ||||||
Sbjct 57049 TCCAAAACATTCCCAATATCCCACAGGATATCAAAGCACTT-TACAAAACCGTCTGGGAA 57107
Query 105779 ATC---AAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAA 105835
||| || ||| | | || | ||||| || ||||| ||| |||||| || |||
Sbjct 57108 ATCTCTCAG-CGAACCA--TTGTTCAGATGGCTGCCGATCGAGGTGCCTTCATCGACCAA 57164
Query 105836 AGTCAA 105841
||||
Sbjct 57165 TCTCAA 57170
Score = 120 bits (132), Expect = 4e-22
Identities = 402/620 (65%), Gaps = 13/620 (2%)
Strand=Plus/Plus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||||||| ||||| | ||||| || || || || || || || || ||| | || ||
Sbjct 55487 CCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAGAGT 55546
Query 104281 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 104339
| | |||||||| || ||||| ||| ||| |||| ||| || | || |||||||
Sbjct 55547 CATTGAGACATATAACCTCATGTCGCAAAAGTAC-TTCACTCATGCCTCTCCTACCCTCT 55605
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| |||||||| || || || ||| || |||||||| || | | ||||| |
Sbjct 55606 TCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAG 55665
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| ||| | || || |||| || || | ||||| | ||| |||||| || |
Sbjct 55666 ACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCG 55725
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| |||||||| | |||| || | | | | | || ||| || || |
Sbjct 55726 GTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTGGTTCCTACATTGCTGGAACGA 55785
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
|||| ||| | || ||| |||| ||||| ||||| || || ||| || | || |
Sbjct 55786 ATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACG 55845
Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| | || | || ||| | | ||| | | || |||| |||||||||||||
Sbjct 55846 TCGACCAGGGAGGTAACAAGCGCCCA---GGAGCGTTTGCCATCTACCTTGAGCCATGGC 55902
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
| |||||| | || ||| | || | || ||||| || | || || | | ||
Sbjct 55903 ATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTC-GT 55961
Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
|| || ||||| ||| || || |||| || ||||| || ||||| | |||||| ||
Sbjct 55962 GCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAG 56021
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| ||| | ||| |||| || |||||| | | ||||| || | | |||| | |||
Sbjct 56022 AATGGTGAATGGACTCTGTTCTGTCCAAATGAAGCACCAGGCTTGGCGGATGTCTATGGT 56081
Query 104813 GAGGAGTTTGAAGCCCTTTA 104832
|| ||||| || || |||||
Sbjct 56082 GATGAGTTCGAGGCTCTTTA 56101
>seq537
Length=102077
Score = 129 bits (142), Expect = 7e-25
Identities = 156/207 (75%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 94791
||||||| || || | || || || ||||||||||| ||| | || ||||||
Sbjct 34758 CAGTTCCTTGCATCCGGAAAAAGGCTGATTGGGCTATCCGCTGGATCGAAGACAAAGAGT 34817
Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851
| | ||||||| |||| ||| |||| ||||| ||| || |||||||||||| |||
Sbjct 34818 C-TACCTTTGCACAGCGTCTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGA 34876
Query 94852 TCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910
||||| |||| | || | ||||| |||||||| || || |||||||| || ||| ||
Sbjct 34877 TCCTT-TGCGTCAATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTC 34935
Query 94911 CAACGAGCTTATCTCTCGTGACGAGGG 94937
||| ||||||||||||||||| |||||
Sbjct 34936 CAATGAGCTTATCTCTCGTGATGAGGG 34962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583250826240320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |