Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq302 154 2e-32 seq537 102 9e-17 >seq302 Length=64523 Score = 154 bits (170), Expect = 2e-32 Identities = 389/589 (66%), Gaps = 2/589 (0%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||||| || || | || ||||| || || ||| | ||||| |||||||| || Sbjct 55503 ATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAGAGTCATTGAGACATATAAC 55562 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 || ||| || |||| |||||| || || | || ||||| |||||||| ||||| | Sbjct 55563 CTCATGTCGCAAAAGTACTTCACTCATGCCTCTCCTACCCTCTTCAACGCTGGTACTCCC 55622 Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297 | || |||||| | || ||||| | | ||||||||| |||||||| |||||||| Sbjct 55623 CAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAGACAGCATCGAGGGCATT 55682 Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357 || || || || || || || | || || ||| |||| ||||| || | || Sbjct 55683 TATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCGGTGGTATTGGTCTTAAC 55742 Query 19358 -TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416 | | | ||||| | |||| | || ||| ||||| || | |||| Sbjct 55743 ATTCACCGC-ATCCGTGGTACTGGTTCCTACATTGCTGGAACGAATGGCTCTTCAAACGG 55801 Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476 || || || ||||||||||| ||||| ||||| ||||| |||||| ||||||| || Sbjct 55802 AATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACGTCGACCAGGGAGGTAA 55861 Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536 ||| ||| || |||| ||||||||||| ||||||||||| ||| | | || || Sbjct 55862 CAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCCATGGCATATGGATATTTTTGAATT 55921 Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596 | | || || || ||||| || | || || | || ||| || || ||| || Sbjct 55922 CTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTCGTGCTCGTGATCTATTCCTTGC 55981 Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGAT 19656 | |||| || || ||||| ||| | ||||||||| | | |||||| ||| | Sbjct 55982 ACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAGAATGGTGAATGGACTCTGTT 56041 Query 19657 GTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTC 19705 || || | ||| || ||| | | || ||||| || || | |||| Sbjct 56042 CTGTCCAAATGAAGCACCAGGCTTGGCGGATGTCTATGGTGATGAGTTC 56090 Score = 143 bits (158), Expect = 3e-29 Identities = 394/600 (66%), Gaps = 3/600 (1%) Strand=Plus/Minus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||||||||| | || ||| || || | || || | ||| ||| || | Sbjct 56083 TCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTCCATTCACCA 56024 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | ||||||||| | ||| || || || || |||| || || ||| || || || Sbjct 56023 TTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAATAGATCACGA 55964 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 ||| | || || | ||| ||||| || || || | || || | || || Sbjct 55963 GCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATA 55904 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||| || |||||||| |||| || ||||||| || ||||||| |||| Sbjct 55903 TGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCCTGGTCGACG 55844 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 || | ||| ||||| |||||||| |||||||| || || || |||| | ||| ||| Sbjct 55843 TATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTC 55784 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCC 79664 || || || | ||| | | || ||| | | | || | || || || || Sbjct 55783 GTTCCAGCAATGTAGGAACCAGTACCACGGATG-CGGTGAATGTTAAGACCAATACCACC 55725 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 || ||| || || | || || || || || || || ||||||||||| ||| Sbjct 55724 GGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTC 55665 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 ||||||||| | | |||||||| | |||||| || | | ||||| |||||||| Sbjct 55664 TTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAA 55605 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 |||||| || | || || |||||| ||||||| ||| || | || ||||| |||| Sbjct 55604 GAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTCTCAATGAC 55545 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCG 79903 | | ||| || |||||||| || | || || ||||| | | || ||| ||||| Sbjct 55544 TCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGCTGTGGGCG 55485 >seq537 Length=102077 Score = 102 bits (112), Expect = 9e-17 Identities = 111/142 (78%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031 |||||||| |||||| | || ||||| ||| || ||||| ||||||||| ||| || || Sbjct 34823 TTTGCACAGCGTCTCGTCGCCTTTGC-TGCTGTCGAAGGTATCTTCTTCAGTGGATCCTT 34881 Query 60032 CTGTG-CTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACG 60090 || | | || |||||||| || ||||||||||| ||||| ||||| | || ||||| | Sbjct 34882 -TGCGTCAATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTCCAATG 34940 Query 60091 AGCTGATTTCCCGGGACGAGGG 60112 |||| || || || || ||||| Sbjct 34941 AGCTTATCTCTCGTGATGAGGG 34962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548515420225920