Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq725 170 2e-37
seq639 131 2e-25
seq302 118 1e-21
seq1192 116 4e-21
seq537 113 5e-20
>seq725
Length=19491
Score = 170 bits (188), Expect = 2e-37
Identities = 178/232 (77%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || || || || |||||||| |||||||| ||||| |||||| || |
Sbjct 8626 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAG--AGCT 8683
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| ||||| ||| | || ||||||| || || ||||| || || || || || |
Sbjct 8684 CCGATACCATTGATAATGTTAAATCTAAAATCCAAGATAAGGAAGGTATCCCACCGGATC 8743
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||| |||||||| ||||||||||| || |||||||||| ||| || || | ||||| |
Sbjct 8744 AGCAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCGGACTCTTTCGGACTACA 8803
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|| |||| ||||| |||||| ||||| ||| || | | || ||||| ||
Sbjct 8804 ATATCCAGAAGGAGAGCACTCTCCATCTGGTCCTGAGATTGCGGGGTGGCCA 8855
Score = 167 bits (184), Expect = 3e-36
Identities = 176/230 (77%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || || || || ||||| ||||| || || ||||| || ||| ||
Sbjct 8397 AATGCAAATCTTCGTTAAAACCCTGACCGGAAAGACCATCACACTTGAAGTCGAG--AGT 8454
Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| |||| |||| ||| | || | |||||||| || || || || || || || ||
Sbjct 8455 TCAGATACGATTGACAATGTTAAATCAAAAATTCAAGATAAAGAAGGCATCCCCCCCGAT 8514
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| || ||||| || || || ||||| ||||||| |||||| || | || |||
Sbjct 8515 CAGCAGCGCCTTATTTTCGCCGGAAAACAACTTGAGGATGGTCGTACTCTCTCGGATTAT 8574
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| |||||||||| |||||||||||||| ||| | ||||| || |||||
Sbjct 8575 AATATCCAAAAGGAGTCCACTCTTCATCTCGTCCTCCGTCTCCGTGGTGG 8624
Score = 147 bits (162), Expect = 2e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
||||| || || ||||| ||||| || || || ||||| |||||| |||| ||| |
Sbjct 8182 GTCAAAACTCTCACCGGTAAGACCATCACCCTAGAGGTGGAGTCATCCGATACCATCGAC 8241
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| | ||| | ||||| || || || || || |||||||||||||||||||| |||||
Sbjct 8242 AACGTTAAGTCGAAAATACAAGATAAAGAAGGCATTCCTCCAGACCAGCAGCGCCTAATC 8301
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| || || ||||| || ||||| | ||||||||| | || || ||| | || |||||
Sbjct 8302 TTCGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTTTCTGATTACAATATTCAGAAGGAG 8361
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
||||||||||| | || | ||||| || || |||
Sbjct 8362 TCCACTCTTCACTTGGTTCTTCGTCTGCGTGGAGGA 8397
Score = 145 bits (160), Expect = 9e-30
Identities = 155/205 (76%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487
||||||| |||||||| || || || |||||||| | ||||| || | | | | |||
Sbjct 7885 TTACCGGAAAGACTATAACCCTCGAAGTTGAGTCGGTTGATACAATCGATAGTGTCAAGT 7944
Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547
| ||||||||||||||||| || |||||||| |||||||| ||||| ||||| || || |
Sbjct 7945 CCAAAATTCAGGACAAGGAAGGGATTCCTCCTGACCAGCAACGTCTGATTTTCGCCGGCA 8004
Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607
|||| | ||||| | ||| ||||| | || ||||| | || ||||| || ||||| |
Sbjct 8005 AGCAGTTGGAGGACGGTCGCACCCTTTCTGATTATAACATTCAGAAGGAGTCAACTCTCC 8064
Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGG 27632
| | || | |||||||| || ||
Sbjct 8065 ACTTGGTTCTTCGTCTTCGTGGCGG 8089
>seq639
Length=25736
Score = 131 bits (144), Expect = 2e-25
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || || || ||||| ||||| | |||| |||
Sbjct 21994 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCAT 21935
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| | ||||| |||||||||||||| || || || || |||||||| |
Sbjct 21934 CGACAATGTAAAGTCGAAAATACAGGACAAGGAGGGTATCCCACCCGATCAGCAGCGATT 21875
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| || ||||| ||||| |||||||| | || || ||| || |||||| |||| ||
Sbjct 21874 GATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGAACGCTAAGTGATTATAATATCCAGAA 21815
Query 27594 GG 27595
||
Sbjct 21814 GG 21813
>seq302
Length=64523
Score = 118 bits (130), Expect = 1e-21
Identities = 290/433 (67%), Gaps = 14/433 (3%)
Strand=Plus/Minus
Query 81328 ATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACGG---CCACCC 81384
|| ||| |||||||||||| || || | ||| | || || ||| | || |||
Sbjct 55912 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 55853
Query 81385 TGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGAC 81444
|||| |||||| | |||||| || || || || | |||||| | || || | |||
Sbjct 55852 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 55793
Query 81445 TGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGC--TGATTGA-AAGA 81501
|| ||||| || | || || || | | || | ||| ||| || ||||
Sbjct 55792 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGA---TGCGGTGAATGTTAAGA 55736
Query 81502 CCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCC 81561
|| || ||||| | ||||||||| ||||||| |||| ||| |||||||| |||
Sbjct 55735 CCAATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCC 55676
Query 81562 TCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG 81621
|||||||| |||| ||||| |||| | ||| || | ||||||||| | |||
Sbjct 55675 TCGATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGG--CTGGGGAG 55618
Query 81622 --CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCAT 81679
|| || ||||| || || || | || ||| |||| || | ||||| |||| ||
Sbjct 55617 TACCAGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTAT 55558
Query 81680 AGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACA 81739
| || || |||| | | | || || ||||| || || ||||| |||||||||| ||
Sbjct 55557 ATGTCTCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCA 55498
Query 81740 TGTACTG-GGGCG 81751
||| ||| |||||
Sbjct 55497 TGTGCTGTGGGCG 55485
>seq1192
Length=144406
Score = 116 bits (128), Expect = 4e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|||||||||||||| ||||| |||||||| ||||| || || || ||||| || ||||||
Sbjct 8873 GACAAGGAGGGAATCCCTCCCGACCAGCAACGTCTGATCTTCGCCGGTAAACAGCTCGAG 8814
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | ||| ||||| | ||||| || | || ||||| || || || || || ||| ||
Sbjct 8813 GACGGTCGCACCCTCTCTGACTACAACATTCAGAAGGAGTCGACCCTCCACCTCGTCCTG 8754
Query 27619 CGTCTTCGCGGTGG 27632
|||||||| |||||
Sbjct 8753 CGTCTTCGTGGTGG 8740
>seq537
Length=102077
Score = 113 bits (124), Expect = 5e-20
Identities = 139/188 (74%), Gaps = 3/188 (2%)
Strand=Plus/Plus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT-GA--ATCGTGGGTCGTCGTTTGGTCAGCGT 64719
||||||||||| ||||| ||||| ||||| || | | ||| | |||| ||||||
Sbjct 34775 AAAAAGGCTGATTGGGCTATCCGCTGGATCGAAGACAAAGAGTCTACCTTTGCACAGCGT 34834
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|||| || ||||| ||| ||||| || ||||| ||| || || || || |||
Sbjct 34835 CTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGATCCTTTGCGTCAATCTTC 34894
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| ||||| |||||||| || | ||||| || ||||| ||||||||
Sbjct 34895 TGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTCCAATGAGCTTATCTCTCGT 34954
Query 64840 GACGAGGG 64847
|| |||||
Sbjct 34955 GATGAGGG 34962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570300647692160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |