Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq725 125 4e-24
seq1192 91.5 9e-14
>seq725
Length=19491
Score = 125 bits (138), Expect = 4e-24
Identities = 156/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||| |||||||||||||||||| || || || || || ||||| || || | || ||
Sbjct 8834 ACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCCTCG 8775
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| |||||||| ||||| |||| ||| || || ||||| || | || ||||| ||| |
Sbjct 8774 AGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGG 8715
Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|| ||| | |||||| || ||| || || |||||| ||||| | || || |||||
Sbjct 8714 AT-TTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATAGTTTT 8656
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||||| | ||||| || || || ||||||
Sbjct 8655 GCCGGTCAGGGTTTTAACGAAGATTTGCATG 8625
Score = 104 bits (114), Expect = 1e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||| |||||| ||||||||| || |||||||| || || || ||
Sbjct 8615 AGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGA 8556
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || ||||||||||| ||||| || || | ||||| || || || || | || ||
Sbjct 8555 CCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCT 8496
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| ||| ||| ||||| |||||| | ||| || ||| ||||| ||||| | ||
Sbjct 8495 TTATCT-TGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGT 8437
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | ||||| || || || |||||
Sbjct 8436 GATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 8398
Score = 102 bits (112), Expect = 5e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | |||||| | ||||| |||||||| |||||| |||||||||||||| ||
Sbjct 8090 GCCGCCACGAAGACGAAGAACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGA 8031
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| || | || || ||||| || || | ||| || ||||| || ||
Sbjct 8030 AAGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGG 7971
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657
| || |||||||| ||| ||| | || || || ||||| || | ||| |
Sbjct 7970 AATCCCTTCCTTGTC-CTGAATTTTGGACTTGACACTATCGATTGTATCAACCGACTCAA 7912
Query 34658 CTTCCACGGTTATCGTTTTACCGGT 34682
|||| | |||||| || || |||||
Sbjct 7911 CTTCGAGGGTTATAGTCTTTCCGGT 7887
>seq1192
Length=144406
Score = 91.5 bits (100), Expect = 9e-14
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||||| || | ||||| || |||||| |||||||| || || ||
Sbjct 8740 CCACCACGAAGACGCAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAG 8799
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || || ||||||||||| || || | ||| || ||||| || ||
Sbjct 8800 AGGGTGCGACCGTCCTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGAGGG 8859
Query 34600 ACTCCCTCCTTGTCTGTG 34617
| ||||||||||||| ||
Sbjct 8860 ATTCCCTCCTTGTCTATG 8877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314724352670744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |