Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq725 105 6e-18 >seq725 Length=19491 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || ||| ||| ||||| ||||||||||| | || || || | || ||||| || Sbjct 8601 ATGAAGAGTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCCTCAAGTTG 8542 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||| || || || ||||| |||||||| |||| ||| | || ||||| | | ||| ||| Sbjct 8541 TTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTAT-CTTGAATTT 8483 Query 39201 CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 || || | | | | | | |||||| ||| || || | ||||| | ||||| | Sbjct 8482 TTGATTTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTCTTTCCGG 8423 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 |||| |||||||| ||||||||||| Sbjct 8422 TCAGGGTTTTAACGAAGATTTGCAT 8398 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| || |||||||| || || ||||| || || | ||| || || | || || Sbjct 8834 ACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCCTCG 8775 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194 |||||||| || ||||| || ||||| ||||| || |||||| || || || || Sbjct 8774 AGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCT-TCCTTATCTTG 8716 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||| | | | | |||||| ||| || || | ||| ||| |||| Sbjct 8715 GATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATAGTTTT 8656 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| |||||||| ||||||||||| Sbjct 8655 GCCGGTCAGGGTTTTAACGAAGATTTGCAT 8626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429538438400984