Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq725 113 3e-20 >seq725 Length=19491 Score = 113 bits (124), Expect = 3e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || |||||||||||||| || ||||| || ||||| || ||||| || | Sbjct 8397 AATGCAAATCTTCGTTAAAACCCTGACCGGAAAGACCATCACACTTGAAGTCGAGAGTTC 8456 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| ||| ||||| | ||||||| || |||||||| | || || |||| Sbjct 8457 AGATACGATTGACAATGTTAAATC-AAAAATTCAAGATAAAGAAGGCATCCCCCCCGATC 8515 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||||| | || || ||||| |||||||| || || | || ||| | ||||| | Sbjct 8516 AGCAGCGCCTTATTTTCGCCGGAAAACAACTTGAGGATGGTCGTACTCTCTCGGATTATA 8575 Query 23789 ACATACAAAAAGAGTCCAC 23807 | || ||||| |||||||| Sbjct 8576 ATATCCAAAAGGAGTCCAC 8594 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || |||||||||||||| || || ||||| || || || |||||||| | | Sbjct 8626 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGCTCC 8685 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| ||||| | ||||| || || |||||| | || || ||||| Sbjct 8686 GATACCATTGATAATGTTAAATC-TAAAATCCAAGATAAGGAAGGTATCCCACCGGATCA 8744 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| |||| ||||| || ||||| || || || | || ||| | || ||||| Sbjct 8745 GCAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCGGACTCTTTCGGACTACAA 8804 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||| ||| | ||| | || | || ||||| || || Sbjct 8805 TATCCAGAAGGAGAGCACTCTCCATCTGGTCCTGAGATTGCGGGGTGG 8852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338003964534944