Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq537 100 2e-16 >seq537 Length=102077 Score = 100 bits (110), Expect = 2e-16 Identities = 193/283 (68%), Gaps = 4/283 (1%) Strand=Plus/Minus Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872 ||||| |||| || || || || ||| || |||| || || || ||||| || | Sbjct 34662 CTTGA-TATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTTCCATCATGA 34604 Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932 |||| || ||||| ||||||| || || | || || ||||| | || | || | Sbjct 34603 TCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTCCGCTGAAACGCTCGA 34544 Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992 | | ||| || || || || || || || || || || ||||| || || || || | Sbjct 34543 CGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATGA 34484 Query 4993 AGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049 |||| | |||||| || | | || ||||||| | | |||||| | | ||||| Sbjct 34483 AGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTTCGAGAGATCAA 34424 Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 ||||||| | ||||||||||| || || ||||| |||||||| Sbjct 34423 CTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACAT 34381 Score = 84.2 bits (92), Expect = 2e-11 Identities = 170/250 (68%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| || ||||| || || ||||| || ||||| ||||| || || | Sbjct 35284 AACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGTCAG 35225 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 ||| || || ||||| ||||| || || || || | |||||| ||| | | || Sbjct 35224 CGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCCCAG 35165 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || || | ||| ||||| ||||| || || || |||| |||||| | | ||| || Sbjct 35164 AGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTTCAT 35105 Query 4427 TCCAATTAATCTCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 ||| | | | | || || || || | ||| | ||||| || || || | || |||| Sbjct 35104 TCCGAGAAGTG-CGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGCTT 35046 Query 4486 CTGTGATTAT 4495 ||||||| || Sbjct 35045 CTGTGATGAT 35036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427042480015544