Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq537 118 2e-21
seq639 102 2e-16
seq1192 96.9 7e-15
seq492 87.8 4e-12
>seq537
Length=102077
Score = 118 bits (130), Expect = 2e-21
Identities = 176/250 (70%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 230161 AAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCC 230220
||||| ||||||||| || || | || |||||||| | || ||| | || |||
Sbjct 35034 AAATCATCACAGAAGCTGTCGCCATCGAGCAGGAGTTCCTCACAGATGCTCTCCCATGCG 35093
Query 230221 GTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTA 230280
||| |||| ||||| || | |||||| | ||||| ||||| || || ||||||||
Sbjct 35094 CACTTCTCGGAATGAACGCCAAGCTCATGTGCCAATACATCGAGTTTGTTGCTGATCGAC 35153
Query 230281 TTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGG 230340
| |||| || || || | ||||||| || ||||| | ||||| |||| ||| ||||
Sbjct 35154 TCCTCGTTGCTCTGGGCAATAAGAAAGTCTACAACTCTACCAACCCATTCGATTTCATGG 35213
Query 230341 AGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAA 230400
| ||| || || || || ||||||||||| || |||||||| | || || || |
Sbjct 35214 ACAACATCTCGCTGACTGGAAAGACTAACTTCTTTGAGAAGCGTGTTGGTGACTACCAGA 35273
Query 230401 GGCCCGGTGT 230410
| | |||||
Sbjct 35274 AGGCTGGTGT 35283
>seq639
Length=25736
Score = 102 bits (112), Expect = 2e-16
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| ||||| || || ||| ||||| ||||| ||||| || || || || || ||||||
Sbjct 21815 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 21874
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || || || || || |||||||||||||| || || || | ||||| | |||
Sbjct 21875 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGTCG 21934
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| || || | ||||| ||||| ||||| ||||| ||||| | ||||| |||||
Sbjct 21935 ATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 21993
>seq1192
Length=144406
Score = 96.9 bits (106), Expect = 7e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | || || || || |||||||||||||
Sbjct 8739 ACCACCACGAAGACGCAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGA 8798
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| || ||||| ||||| ||||||| |||||| ||||| ||
Sbjct 8799 GAGGGTGCGACCGTCCTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGAGG 8858
Query 282992 AATACCCTCCTTGTCT 283007
|| ||||||||||||
Sbjct 8859 GATTCCCTCCTTGTCT 8874
>seq492
Length=44926
Score = 87.8 bits (96), Expect = 4e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 315666 CACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCAC 315725
||| ||||| ||||| |||||| |||| | || ||||| ||| ||||| || |
Sbjct 5557 CACACCACCCTCGAAAGACTTAAGTGCCTTGGACAGAGCACCCAGAGAATCGCGATCGAG 5498
Query 315726 AAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGA 315784
| ||||||||||||| ||||| ||||| | ||| || ||||||| ||||| ||| |||
Sbjct 5497 ATAGTTGGTCGGCTCGTCAAGTACGATCAAGTGAGGCCGTTGCCA-AGAGCAAGCGGCGA 5439
Query 315785 TAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAGTGGTAAATT 315844
|||| || | || ||||| || || ||||| ||||| || || | | | |
Sbjct 5438 GCACGACTTTAACACGCTGACCACCGGAGAGACCACGCATGCGCGAGTGGGAGACCAGCT 5379
Query 315845 CTGGGTCAAGGCCAA 315859
| | ||||||||||
Sbjct 5378 CGGCATCAAGGCCAA 5364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046720853278672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |