Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq537 118 2e-21 seq639 102 2e-16 seq1192 96.9 7e-15 seq492 87.8 4e-12 >seq537 Length=102077 Score = 118 bits (130), Expect = 2e-21 Identities = 176/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 230161 AAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCC 230220 ||||| ||||||||| || || | || |||||||| | || ||| | || ||| Sbjct 35034 AAATCATCACAGAAGCTGTCGCCATCGAGCAGGAGTTCCTCACAGATGCTCTCCCATGCG 35093 Query 230221 GTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTA 230280 ||| |||| ||||| || | |||||| | ||||| ||||| || || |||||||| Sbjct 35094 CACTTCTCGGAATGAACGCCAAGCTCATGTGCCAATACATCGAGTTTGTTGCTGATCGAC 35153 Query 230281 TTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGG 230340 | |||| || || || | ||||||| || ||||| | ||||| |||| ||| |||| Sbjct 35154 TCCTCGTTGCTCTGGGCAATAAGAAAGTCTACAACTCTACCAACCCATTCGATTTCATGG 35213 Query 230341 AGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAA 230400 | ||| || || || || ||||||||||| || |||||||| | || || || | Sbjct 35214 ACAACATCTCGCTGACTGGAAAGACTAACTTCTTTGAGAAGCGTGTTGGTGACTACCAGA 35273 Query 230401 GGCCCGGTGT 230410 | | ||||| Sbjct 35274 AGGCTGGTGT 35283 >seq639 Length=25736 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || ||||| || || ||| ||||| ||||| ||||| || || || || || |||||| Sbjct 21815 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 21874 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || || || || || || |||||||||||||| || || || | ||||| | ||| Sbjct 21875 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGTCG 21934 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || || | ||||| ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 21935 ATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 21993 >seq1192 Length=144406 Score = 96.9 bits (106), Expect = 7e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || || ||||||||||||| Sbjct 8739 ACCACCACGAAGACGCAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGA 8798 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || ||||| ||||| ||||||| |||||| ||||| || Sbjct 8799 GAGGGTGCGACCGTCCTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGAGG 8858 Query 282992 AATACCCTCCTTGTCT 283007 || |||||||||||| Sbjct 8859 GATTCCCTCCTTGTCT 8874 >seq492 Length=44926 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 315666 CACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCAC 315725 ||| ||||| ||||| |||||| |||| | || ||||| ||| ||||| || | Sbjct 5557 CACACCACCCTCGAAAGACTTAAGTGCCTTGGACAGAGCACCCAGAGAATCGCGATCGAG 5498 Query 315726 AAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGA 315784 | ||||||||||||| ||||| ||||| | ||| || ||||||| ||||| ||| ||| Sbjct 5497 ATAGTTGGTCGGCTCGTCAAGTACGATCAAGTGAGGCCGTTGCCA-AGAGCAAGCGGCGA 5439 Query 315785 TAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAGTGGTAAATT 315844 |||| || | || ||||| || || ||||| ||||| || || | | | | Sbjct 5438 GCACGACTTTAACACGCTGACCACCGGAGAGACCACGCATGCGCGAGTGGGAGACCAGCT 5379 Query 315845 CTGGGTCAAGGCCAA 315859 | | |||||||||| Sbjct 5378 CGGCATCAAGGCCAA 5364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046720853278672