Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq725 109 5e-19 seq1192 105 6e-18 seq639 86.0 6e-12 >seq725 Length=19491 Score = 109 bits (120), Expect = 5e-19 Identities = 112/145 (77%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | |||| || || || |||||||||||||||||| || || Sbjct 8090 GCCGCCACGAAGACGAAGAACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGA 8031 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||| || | ||||||||||||||| ||||| || || ||||| | || Sbjct 8030 AAGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGG 7971 Query 41755 AACGCTCTCCTTGTCCATGATTTTT 41779 || | ||||||||| ||| |||| Sbjct 7970 AATCCCTTCCTTGTCC-TGAATTTT 7947 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| |||||||||||| || || || || Sbjct 8396 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 8337 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || ||||||||||||||||| || |||||||| ||||| | ||| Sbjct 8336 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 8277 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || || ||| | || |||| | | |||| | | | || ||| |||||||| Sbjct 8276 ATGC-CTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCAC 8218 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || ||||| || || || || |||| Sbjct 8217 CTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGACGA 8180 >seq1192 Length=144406 Score = 105 bits (116), Expect = 6e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || ||||| | || || || || || ||||||||||||||| ||||| Sbjct 8737 CCACCACCACGAAGACGCAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCA 8796 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 ||||||||||| |||| |||||||| || |||||||| ||||| || || ||||| | Sbjct 8797 GAGAGGGTGCGACCGTCCTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGA 8856 Query 41753 GGAACGCTCTCCTTGTCCATG 41773 || | | ||||||||| ||| Sbjct 8857 GGGATTCCCTCCTTGTCTATG 8877 >seq639 Length=25736 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/183 (71%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| || ||||| || || || || |||| |||||||||||||| ||||| | Sbjct 21813 CCTTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 21872 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 ||| ||||| || || | || | | |||||||||| ||||| ||| || | Sbjct 21873 TCAATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGT 21932 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | || ||||| ||||| ||||| | || || || || ||||| || ||||| || Sbjct 21933 CG--ATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 21990 Query 41851 GAA 41853 ||| Sbjct 21991 GAA 21993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462296094601600