Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq246 113 7e-20 >seq246 Length=239075 Score = 113 bits (124), Expect = 7e-20 Identities = 168/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 ||||||||| || | || || || || || || || || || | || | || || Sbjct 189646 AATGCAAATCTTCGTTAAAACCCTGACCGGAAAGACCATCACACTTGAAGTCGAGAGTTC 189587 Query 124597 ATGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 | ||||| ||| ||| ||||| || |||||||||||||||||||| || || || ||| Sbjct 189586 A-GATACGATTGACAATGTTAAATCA-AAAATTCAAGATAAAGAAGGCATCCCCCCCGAT 189529 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || || | |||||||| || ||||||||| | |||||| |||| || | |||||| Sbjct 189528 CAGCAGCGCCTTATTTTCGCCGGAAAACAACTTGAGGATGGTCGTACTCTCTCGGATTAT 189469 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| || || ||| | ||| | || | ||| | || ||||| || Sbjct 189468 AATATCCAAAAGGAGTCCACTCTTCATCTCGTCCTCCGTCTCCGTGGTGGCAT 189416 Score = 98.7 bits (108), Expect = 2e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| || | || || || || ||||||||||| || | || |||| ||| Sbjct 189417 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGC-TC 189359 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| | ||| ||||| |||||||| |||||||| ||||| ||||| Sbjct 189358 CGATACCATTGATAATGTTAAATCTAAAATCCAAGATAAGGAAGGTATCCCACCGGATCA 189299 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || ||||| || ||||| | |||||| |||| || | || || || Sbjct 189298 GCAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCGGACTCTTTCGGACTACAA 189239 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||| || || || ||| | ||| |||| | | || || ||||| Sbjct 189238 TATCCAGAAGGAGAGCACTCTCCATCTGGTCCTGAGATTGCGGGGTGG 189191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755452307708800