Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq246 123 2e-23
seq257 96.9 3e-15
seq12 95.1 1e-14
>seq246
Length=239075
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || || ||||||| |||| |||| || ||| || || || ||||| ||
Sbjct 189191 CCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAA 189250
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || ||||||||||||||| ||||| |||| ||||| |||||||| || ||
Sbjct 189251 AGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGG 189310
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || ||||| ||| ||||| |||||| | || | ||| || | |||||| ||
Sbjct 189311 ATACCTTCCTTATCTTGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACT 189370
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| | || | |||||||||||||| ||||| || || || ||||||
Sbjct 189371 TCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCATG 189418
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| ||||| || || ||||| | ||| || |||||| || ||||||||
Sbjct 189449 GTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCCTCAAGTTGTTTTCCG 189508
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || || |||||||||||||| || ||||| || || ||| ||||||| ||||
Sbjct 189509 GCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTATCTTGAATTTTTGATTTA 189568
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | || || | |||||||| || | || | || || |||||||| |||
Sbjct 189569 ACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTT 189628
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || || |||||
Sbjct 189629 TTAACGAAGATTTGCAT 189645
>seq257
Length=236519
Score = 96.9 bits (106), Expect = 3e-15
Identities = 131/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || || || ||||| || | || || ||||||||||| || |||||| ||||
Sbjct 59008 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 59067
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTTAACCTGTTC 118669
| |||||||||||||| || || |||||||||| |||| ||||| || || | ||
Sbjct 59068 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGT-ATTTTCGACTTTACATTGTC 59126
Query 118670 GACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
|| ||| || || ||||||||||| ||| | || ||||| || || || || || ||
Sbjct 59127 GATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 59186
>seq12
Length=85050
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || ||||||||||| || | ||||| |||||||||||
Sbjct 76189 GTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTG 76130
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646
||| || ||| |||| ||||| ||||| |||||||| || ||||||||||||
Sbjct 76129 TTTACCGGCGAAGATCAGACGTTGCTGGTCGGGAGGGATTCCCTCCTTGTCT 76078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828332662572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |