Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq246 87.8 2e-12
>seq246
Length=239075
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||| | | ||| | ||||| || | ||| |||||| ||||||||||||||||
Sbjct 189646 TCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGA 189705
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || || |||| || |||||||| || ||||| || || ||||||||||| | ||
Sbjct 189706 AAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGG 189765
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134
| || || ||| | || |||| | | | ||| | | | || ||| || ||||
Sbjct 189766 AATGC-CTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCA 189824
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| || | |||||||| || || || || || || ||
Sbjct 189825 CCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861
Score = 86.0 bits (94), Expect = 7e-12
Identities = 147/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||| ||| | ||||||||||| || |||||||| || | |||||||| | || ||
Sbjct 189209 ACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCCTCG 189268
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
||||| |||||||| || || || || ||||| || | || | | ||||| || |
Sbjct 189269 AGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGG 189328
Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151
||||| ||| | | | | || || |||| || || || | ||| || |||
Sbjct 189329 ATTTTAGATTTAACATTATCAATGGTATCGGAGCTC---TCAACTTCAAGCGTAATAGTT 189385
Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || || || || || |||||||||||
Sbjct 189386 TTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 189417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571814805241480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |