Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq279 208 1e-48
seq326 116 5e-21
>seq279
Length=233879
Score = 208 bits (230), Expect = 1e-48
Identities = 584/894 (65%), Gaps = 2/894 (0%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|||||||| || || | |||| |||| | || ||||| ||||| | || | |
Sbjct 179801 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 179860
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|| || || | | || || ||||||||||| |||||||| ||||||| || | |||
Sbjct 179861 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 179920
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | | | ||| || || || || || ||||| | ||| | | |
Sbjct 179921 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 179980
Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428
||||| |||||| || || | ||| ||||| | |||| || || ||||| ||||||
Sbjct 179981 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 180040
Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488
|| || | |||||| || |||||||| |||| | | ||| |||| ||| ||||||||
Sbjct 180041 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 180100
Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548
||||| || || | || ||| ||| | |||| || ||| |||||
Sbjct 180101 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 180160
Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608
|| || || || | || || |||| || || ||| | |||||||| ||||| ||
Sbjct 180161 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 180220
Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668
||||| || || |||| | || || || || | ||| || | | | ||| ||
Sbjct 180221 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 180280
Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728
|| || || | ||||||||| || || || || | |||| || | || || || |||
Sbjct 180281 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 180340
Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788
||||| || || | || | || || || | || |||||||| | |||||||
Sbjct 180341 TCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGC 180400
Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848
|| || | || ||| ||| || ||| | |||||| || | |||| || ||
Sbjct 180401 TGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTG 180460
Query 63849 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCC 63908
|| || ||||| | ||| ||||| || ||||||| |||| | || |||| || ||||
Sbjct 180461 AATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATCC 180520
Query 63909 TTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTT 63968
|| | | | || || || ||| | ||| || || || | | | || ||
Sbjct 180521 GCATGTCTCATTACGATTTCGTACGTACTCTGTGATATCATGGGGGCAGGACGTCCGTTC 180580
Query 63969 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTC 64027
|| ||||| |||| | | | ||| || ||||| || | ||| | || || ||||
Sbjct 180581 TTGGGATTGTGGTAGTGGTACAGATCATCTATCAC-GGACGAGAATTGCTTCTTGGTTTG 180639
Query 64028 CTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
|||||| || || |||| || || | || |||||||| || || || |||||
Sbjct 180640 CTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 180693
>seq326
Length=563541
Score = 116 bits (128), Expect = 5e-21
Identities = 202/293 (69%), Gaps = 3/293 (1%)
Strand=Plus/Plus
Query 33843 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33902
|| || | ||| |||||||| | ||| || |||| || || |||||||| ||
Sbjct 320402 TCCTTGATATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTTCCATCATG 320461
Query 33903 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCT 33962
||||| || |||||||| |||| ||||| | | ||| |||||| | || || ||
Sbjct 320462 ATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTCCGCTGAAACGCTCG 320521
Query 33963 GCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 34022
| | || ||||| || |||||||| || || || || ||||| || ||| ||
Sbjct 320522 ACGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATG 320581
Query 34023 AAATATTTTTCGTCTGGTGTTAGTTTATT---CCAATCATTGATATCTTTAGATATATCC 34079
|| ||| ||||| | | | |||| ||| |||| | |||||| || | |||
Sbjct 320582 AAGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTTCGAGAGATCA 320641
Query 34080 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132
|||||||| | |||||||| ||||||||||| || || ||||| | ||||||
Sbjct 320642 ACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACATTTGCCAGAT 320694
Score = 102 bits (112), Expect = 1e-16
Identities = 293/448 (65%), Gaps = 2/448 (0%)
Strand=Plus/Plus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
|||||| || || ||||| ||||| ||||| || || || || ||||| |||||
Sbjct 319779 CATAACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGT 319838
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
|| || || || ||||||||||| || || |||||| ||||| | ||| ||| ||
Sbjct 319839 CAGCGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCC 319898
Query 33398 CAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33457
|| || | | || ||| || || || || || ||| ||| | | ||
Sbjct 319899 CAGAGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTT 319958
Query 33458 CATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGC 33517
|||||| | ||| ||| ||||| | || || || || || || |||| || ||
Sbjct 319959 CATTCCGAGAAGTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGC 320018
Query 33518 ATTTGTTATAATAAATCT-AACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576
| ||| || || ||| ||| | ||| || || | || | || || |
Sbjct 320019 TTCTGTGATGATTT-TCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGA 320077
Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636
| || ||||| || ||| | |||||| || | | || | || || ||||| |
Sbjct 320078 GAAGGCAGGCGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGG 320137
Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696
| || || ||||| ||||||||||| || ||||| || || || || || ||||| |
Sbjct 320138 TAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATCCACTGA 320197
Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGC 33724
||||||| ||||| || |||||||||||
Sbjct 320198 AGAAGATACCTTCGACAGCAGCAAAGGC 320225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629814521766480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |