Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq279 212 9e-50
seq326 127 3e-24
>seq279
Length=233879
Score = 212 bits (234), Expect = 9e-50
Identities = 585/894 (65%), Gaps = 2/894 (0%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|||||||| || || | ||||| | || || || ||| | ||||| | || | |
Sbjct 179801 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 179860
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || |||| | || || ||||||||||| |||||||| ||||||| || | |||
Sbjct 179861 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 179920
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
||||| | | | | || || || || || || ||||| | ||| | | |
Sbjct 179921 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 179980
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
||||| |||||| || || | ||| ||||| | |||| || || ||||| ||||||
Sbjct 179981 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 180040
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | |||||| || |||||||| |||| | | ||| |||| ||| || || ||
Sbjct 180041 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 180100
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220
| ||||| || || | || ||| ||| | |||| || ||| |||||
Sbjct 180101 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 180160
Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280
|| || || || | || || |||| || || ||| | || ||||| ||||||||
Sbjct 180161 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 180220
Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 80340
||||| || || |||| | || || || || | ||| || | | ||| ||
Sbjct 180221 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 180280
Query 80341 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 80400
|| || || | ||||||||| || || || || | |||| |||| || || || |||
Sbjct 180281 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 180340
Query 80401 TCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGC 80460
||||| || ||| | || | || || || | || |||||||| | |||||||
Sbjct 180341 TCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGC 180400
Query 80461 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520
|| || | || | | |||| ||| ||| | ||||||||| | |||| || ||
Sbjct 180401 TGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTG 180460
Query 80521 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 80580
|| || ||||| | ||| ||||| || ||||||| |||| | ||||||| | ||||
Sbjct 180461 AATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATCC 180520
Query 80581 TTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 80640
|| | | | || | || || | ||| || || || | | | || ||
Sbjct 180521 GCATGTCTCATTACGATTTCGTACGTACTCTGTGATATCATGGGGGCAGGACGTCCGTTC 180580
Query 80641 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTC 80699
|| ||||| |||| | | | ||| || ||||| || | ||| | || || ||||
Sbjct 180581 TTGGGATTGTGGTAGTGGTACAGATCATCTATCAC-GGACGAGAATTGCTTCTTGGTTTG 180639
Query 80700 CTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
|||||| || || ||||| || || | || |||| ||| || || ||||||||
Sbjct 180640 CTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 180693
>seq326
Length=563541
Score = 127 bits (140), Expect = 3e-24
Identities = 302/454 (67%), Gaps = 2/454 (0%)
Strand=Plus/Plus
Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715
|||||| || || ||||| ||||| ||||| || || || || ||||| |||||
Sbjct 319779 CATAACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGT 319838
Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775
|| || || || ||||||||||| || || |||||| || || | ||| ||| ||
Sbjct 319839 CAGCGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCC 319898
Query 49776 CAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 49835
|| || | | || ||| || ||||| || || ||| ||| | | ||
Sbjct 319899 CAGAGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTT 319958
Query 49836 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 49895
|||||| | |||| ||| ||||| | || || || || || || |||| || ||
Sbjct 319959 CATTCCGAGAAGTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGC 320018
Query 49896 ATCTGTTATAATAGATCT-AACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954
||||| || || ||| ||| | ||| || || | || | || || |
Sbjct 320019 TTCTGTGATGATTT-TCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGA 320077
Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014
| || ||||| || ||| | |||||| || | | || || || |||||||| |
Sbjct 320078 GAAGGCAGGCGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGG 320137
Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAA 50074
| || || ||||| ||||||||||| || ||||| || || |||||||| || ||| |
Sbjct 320138 TAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATCCACTGA 320197
Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
||||||| ||||| || || |||||||| || ||
Sbjct 320198 AGAAGATACCTTCGACAGCAGCAAAGGCGACGAG 320231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718265289461240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |