Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq279 208 1e-48
seq326 116 5e-21
>seq279
Length=233879
Score = 208 bits (230), Expect = 1e-48
Identities = 584/894 (65%), Gaps = 2/894 (0%)
Strand=Plus/Plus
Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003
|||||||| || || | ||| | || || || |||||| ||||| | || | |
Sbjct 179801 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 179860
Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063
|| || |||| | | || ||||||||||| |||||||| ||||||| || | |||
Sbjct 179861 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 179920
Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123
||||| | | | | || || || || || || ||||| | ||| | | |
Sbjct 179921 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 179980
Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183
||||| |||||| || || | ||| ||||| | |||| || || ||||| ||||||
Sbjct 179981 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 180040
Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243
|| || | |||||| || |||||||| |||| | | ||| |||| ||| || || ||
Sbjct 180041 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 180100
Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCT 72303
| ||||| || || | || ||| ||| | |||| || | ||| |||||
Sbjct 180101 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 180160
Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 72363
|| || || || | || || |||| || || ||| | || ||||| ||||||||
Sbjct 180161 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 180220
Query 72364 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 72423
|| || || ||| |||| | || || || || | ||| || | | ||| ||
Sbjct 180221 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 180280
Query 72424 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 72483
|| || || | ||||||||| || || || || | |||| |||| || || || |||
Sbjct 180281 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 180340
Query 72484 TCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGC 72543
||||| || ||| | || | || || || | || |||||||| | ||| |||
Sbjct 180341 TCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGC 180400
Query 72544 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 72603
|| || | || | | |||| ||| ||| | |||||| || | |||| || ||
Sbjct 180401 TGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTG 180460
Query 72604 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCC 72663
|| || ||||| | ||| ||||| || ||||||| |||| | || |||| | ||||
Sbjct 180461 AATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATCC 180520
Query 72664 TTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 72723
|| | | | || || || || | ||| || || || | | | || ||
Sbjct 180521 GCATGTCTCATTACGATTTCGTACGTACTCTGTGATATCATGGGGGCAGGACGTCCGTTC 180580
Query 72724 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTC 72782
|| ||||| |||| | | | ||| || ||||| || | ||| | || || ||||
Sbjct 180581 TTGGGATTGTGGTAGTGGTACAGATCATCTATCAC-GGACGAGAATTGCTTCTTGGTTTG 180639
Query 72783 CTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
|||||| || || ||||| || || | || |||||||| || || ||||||||
Sbjct 180640 CTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 180693
Score = 100 bits (110), Expect = 4e-16
Identities = 204/301 (68%), Gaps = 4/301 (1%)
Strand=Plus/Plus
Query 70791 CTTG-TCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849
|||| |||| || ||||| || |||| || ||||| | ||||| ||||| |||||||
Sbjct 178578 CTTGATCCACAGTGAACTGGATTGGAGCAGACGCGGCCATTGTACGGAGATAATACATGC 178637
Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAG 70909
| || || | ||||| |||| ||| || ||||| || || | || | | |
Sbjct 178638 CAGTCTTCAAGCCGAGTTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTACCCATGGTGG 178697
Query 70910 GATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 70969
| || | ||||||||| | || ||| ||| ||||||||||| || | || ||||
Sbjct 178698 GCTCCTTCAAGTGAATATTGAGAGATTGAGATTGGTCGATGAAGGCACCTCGATCGGCAG 178757
Query 70970 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 71029
|||| | | || || || | |||||||| | ||||| |||| | || ||||
Sbjct 178758 CCATCTGAACAATGGTTCGCTGAGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATAT 178817
Query 71030 CTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGA 71086
| | ||| | || | | || || ||||| || |||||||||||||| | ||| || |
Sbjct 178818 CCTGTGGGATATTGGGAATGTTTTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCA 178877
Query 71087 T 71087
|
Sbjct 178878 T 178878
>seq326
Length=563541
Score = 116 bits (128), Expect = 5e-21
Identities = 296/448 (66%), Gaps = 2/448 (0%)
Strand=Plus/Plus
Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820
|||||| || || ||||| ||||| ||||| || || || || |||||||||||
Sbjct 319779 CATAACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGT 319838
Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880
|| || || || ||||||||||| || || |||||| || || | ||| ||| ||
Sbjct 319839 CAGCGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCC 319898
Query 41881 CAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATT 41940
|| || | | || ||| || | || || || ||| ||| | | ||
Sbjct 319899 CAGAGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTT 319958
Query 41941 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 42000
|||||| | |||| ||| ||||| | || || || || || || || | ||| ||
Sbjct 319959 CATTCCGAGAAGTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGC 320018
Query 42001 GTCTGTTATAATAGATCTTA-CTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 42059
||||| || || ||| | | | ||| || || | | | || || |
Sbjct 320019 TTCTGTGATGATTT-TCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGA 320077
Query 42060 TCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACG 42119
| || ||||| || ||| | ||||||||| | | || | || |||||||| |
Sbjct 320078 GAAGGCAGGCGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGG 320137
Query 42120 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAA 42179
| || || ||||| ||||||||||| || ||||| || || |||||||| |||||| |
Sbjct 320138 TAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATCCACTGA 320197
Query 42180 AGAAGATTCCTTCTACTGCCGCAAAGGC 42207
||||||| ||||| || || ||||||||
Sbjct 320198 AGAAGATACCTTCGACAGCAGCAAAGGC 320225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671135919807160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |