Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq246 136 9e-27
>seq246
Length=239075
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || || || |||||||| || || ||||| | ||| ||
Sbjct 189434 AGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCC 189493
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||||||||| || ||||| || | ||| ||||| || || || |||||||||||
Sbjct 189494 TCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTATCT 189553
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
||||| |||| ||| ||||| || | ||||| | || || || ||||| || |||
Sbjct 189554 TGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTC 189613
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || || ||||| || || || ||||||
Sbjct 189614 TTTCCGGTCAGGGTTTTAACGAAGATTTGCATT 189646
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | ||| || | || | || || || ||||||||||| || |||
Sbjct 189644 ATTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCA 189703
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | |||||| || || || || || || || ||||| | ||| || || |||
Sbjct 189704 GAAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGA 189763
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||||||||| || || || | || || || || | ||||||| | ||
Sbjct 189764 GGAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCC 189823
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|||||||| || || |||||||| || || ||||| ||
Sbjct 189824 ACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151392631853828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |