Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq246 105 6e-18 >seq246 Length=239075 Score = 105 bits (116), Expect = 6e-18 Identities = 157/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| |||| | | || || ||||| ||| |||||| ||||| |||||||||| Sbjct 189647 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGA- 189705 Query 48560 AATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || || |||||||||||||||| ||| || | |||| |||||||| || || Sbjct 189706 AAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGG 189765 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | | ||| || || |||||| ||| | | | || |||||||||| |||||| Sbjct 189766 AATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCG--ATGGTATCGGATGACTCC 189823 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 ||| | || ||||| ||||||||||||||||| || Sbjct 189824 ACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249192606391