Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq279 242 1e-58
>seq279
Length=233879
Score = 242 bits (268), Expect = 1e-58
Identities = 479/698 (69%), Gaps = 18/698 (3%)
Strand=Plus/Minus
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449
|||||||| ||||| |||||| || ||| | ||| |||||||| | ||| ||
Sbjct 180469 TTTCGGATTCAAGACCCTGGAGAGGTCTTACTTGCTTCGAATCAATGGCAAGGTTGCAGA 180410
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
||||| ||||| ||| | ||||||||||||||||| ||||| | || || ||
Sbjct 180409 GCGCCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAG 180350
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACA 363567
| ||||| |||||||| || | || || ||| ||||| || ||| | || ||
Sbjct 180349 AGTCATTGAGACATATAACCTCAT--GTCGCAAAAGTACTTCACTCATGCCTCTCCTACC 180292
Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627
| | ||| ||||| |||| | || |||||| | || ||||| || | | ||||||
Sbjct 180291 CTCTTCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAG 180232
Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687
|| || ||||||||| || | |||||| || || | ||||||||| ||||| ||||
Sbjct 180231 GAAGACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACC 180172
Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTT---ACATTCG 363743
|| || || |||||| | || ||| | |||| || | ||| |||||
Sbjct 180171 GCCGGTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTG----GTTCCTACATTGC 180116
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
|| || || | || || || | ||||| ||||| || || || | || |||||
Sbjct 180115 TGGAACGAATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAACACTGC 180056
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
|| |||||||||||||| || |||||| ||| |||||||| || || || |||||
Sbjct 180055 CAGATACGTCGACCAGGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCC 179996
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
||| ||||||||||| || | || |||||||||||| || || || ||| |
Sbjct 179995 ATGGCATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGT 179936
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| |||||||| ||| |||||||||| |||| | |||||||| ||||| ||
Sbjct 179935 TCGTGCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACGCGTTGA 179876
Query 363984 G--GCA-GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040
| | | ||| ||| ||| | || || || ||| | ||| ||||| | | |||||
Sbjct 179875 GAAGAATGGT--GAA-TGGACTCTGTTCTGTCCAAATGAAGCACCAGGCTTGGCGGATGT 179819
Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
| ||||| || | | ||||| || || |||||||
Sbjct 179818 CTATGGTGATGAGTTCGAGGCTCTTTATGAGAAGTATG 179781
Score = 111 bits (122), Expect = 4e-19
Identities = 671/1064 (63%), Gaps = 30/1064 (3%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| |||||||| |||| ||| || | || | || | |||||| || | |||| ||||
Sbjct 179688 GCCCAGAAGCTTTGGTATGCTATTCTCGAGGCTCAAACTGAGACTGGTAACCCCTTTATG 179629
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||| ||| | |||||| ||| |||||| || |||| || || ||| || ||
Sbjct 179628 CTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAAAAGAACCTGGGGACTATT-AGAAG 179570
Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289
| || ||||| |||||||| || |||||| | | || || || ||| || |||||
Sbjct 179569 CTCCAATCTATGCACCGAGATCATCGAATACTGCTCACCTGATGAAGTTGCTGTTTGTAA 179510
Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCA-----G 364344
| | || || || || | || | || || | | || | || | | |
Sbjct 179509 CTTGGCTTCCATTGCCTTACCTACCTTCGTGGATGCTGTGCGTGGAGAATATGATTTTGG 179450
Query 364345 CAT-CTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAG 364401
|| || | || ||||| | || | | | |||| || ||| | ||||||
Sbjct 179449 CAAGCTCCACGAAGTAACTCAAGTCGTCGTTC--GCAACCTTAACAGAATCATCGACCGA 179392
Query 364402 AATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTT 364461
|| || |||||| | |||||| | || || | || |||||||| ||||
Sbjct 179391 AACTACTATCCAGTCGAGGAAGCCAAACGAAGCAACTTCCGCCATCGCCCAATTGCCTGC 179332
Query 364462 GGTGTACAGGGCCTCGCTGACGTTTTTAT-GATGCTCAAGATGGCATTTGATTCGCCTGA 364520
||||| ||||| || ||||| | ||| | | | | | | |||||||||| |||||
Sbjct 179331 GGTGTTCAGGGTCTTGCTGATGCTTTCCTCGCTTTGCGACTTC-CATTTGATTCCCCTGA 179273
Query 364521 CGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTC 364580
|| | |||| | || ||||||||||| || ||| ||||||| ||
Sbjct 179272 AGCCAAGCAGTTGAATATTCAAATTTTTGAAACAATTTACCACGCCTGTTTGACTGCGTC 179213
Query 364581 GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCA 364640
||||| | || || | || || || | ||||| || || || | || ||
Sbjct 179212 CTGTGAGCTAGCTAAGGTTGACGGCCCATATTCCTCATATGAAGGTTCTCCAGTCTCACA 179153
Query 364641 GGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATAC 364700
||| | | |||| |||| | ||| |||||| || | | | ||| | |||||| |
Sbjct 179152 GGGCATCCTTCAGTATGATATGTGGGGTGTCACTCCCACCGATCTCTGGGATTGGGATTC 179093
Query 364701 GCT---ACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC---TCCCTCGTTACAGCGCC 364754
|| || | || | |||||||| ||||||| | || ||| || ||
Sbjct 179092 TCTGAAACAGGAGATCGCT---AAGCATGGAGTTCGCAACAGTTTGCTTGTT---GCTCC 179039
Query 364755 CATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTAC 364814
|||||| || || ||| ||||| || ||| |||||| ||||||||||| | ||
Sbjct 179038 CATGCCTACTGCCAGCACTAGCCAGATTCTTGGATTCAACGAATGCTTCGAACCTTACAC 178979
Query 364815 AAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCT 364874
||| | || || ||||| || ||| | || || || | | || || || ||
Sbjct 178978 CTCTAATATCTACTCGCGCCGTGTCCTTGCAGGCGAGTTCCAAATTGTCAACCCGTGGCT 178919
Query 364875 AGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934
| ||||| || ||| || || ||| |||| ||||||||| || || ||
Sbjct 178918 TTTGAAGGACCTGGTGGACTTGGGTCTCTGGTCCGACAACATGAAGAATCGAATTATTGC 178859
Query 364935 CGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAA 364994
| | || || | || |||||||| | ||| | ||| | || | |||||||
Sbjct 178858 AGATGGAGGCTCCATCCAAAACATTCCCAATATCCCACAGGATATCAAAGCACTTTACAA 178799
Query 364995 AACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTT 365054
|||||| |||||||| || |||||| | || | ||||| |||||||| ||||| ||
Sbjct 178798 AACCGTCTGGGAAATCTCTCAGCGAACCATTGTTCAGATGGCTGCCGATCGAGGTGCCTT 178739
Query 365055 TATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGCCAAGCTT 365112
||| || || || | || |||||| ||| |||| ||| | ||| ||
Sbjct 178738 CATCGACCAATCTCAATCTCTCAA--TATTCACTTGAAGGAGCCCACCATGGGTAAGATT 178681
Query 365113 ACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|| |||||| ||| ||| |||||| ||| | ||||| ||
Sbjct 178680 ACCAGCATGCACTTCACCGGCTGGAAACTCGGCTTGAAGACTGG 178637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303347070605762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |