Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq246 134 1e-26
seq12 107 2e-18
seq257 102 8e-17
>seq246
Length=239075
Score = 134 bits (148), Expect = 1e-26
Identities = 160/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| ||| || || || || | || |||||||| ||||| ||||||||
Sbjct 189647 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 189706
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| ||||||||||| ||| |||||| ||||||||||| |||||
Sbjct 189707 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 189766
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| |||||||| || |||||| ||| | | || | ||||||| ||||| |
Sbjct 189767 ATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCACC 189826
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|| | ||| | ||| |||||||| |||||||| ||||
Sbjct 189827 TCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGACGA 189863
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || | ||| | || ||||||||||| || || |||||
Sbjct 189418 GCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCCGA 189477
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||||| || || || || ||| | || | |||||||| || || ||
Sbjct 189478 GAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGG 189537
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185
||| |||||||| || ||| ||| || || | | | || | ||||| | |||||
Sbjct 189538 GATGCCTTCTTTATC-TTGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCGA 189596
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| || ||||| ||||| || |||||
Sbjct 189597 CTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 189645
>seq12
Length=85050
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | |||||| || | || | |||||||||||| ||||||||||| ||
Sbjct 76212 CCACCACGAAGACGCAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAG 76153
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||| || || ||| |||| | ||| |||||||| ||||||
Sbjct 76152 AGGGTGCGACCGTCCTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGAGGG 76093
Query 131128 ATTCCTTCTTTGTC 131141
||||| || |||||
Sbjct 76092 ATTCCCTCCTTGTC 76079
>seq257
Length=236519
Score = 102 bits (112), Expect = 8e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || || || ||||| || | || || |||||| ||||||||||| ||| |||
Sbjct 59006 CCTTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 59065
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||| || || ||||| || || ||||| |||||| ||| | | |
Sbjct 59066 TCAATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGT 59125
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | |||||| ||||||||| |||| ||| | ||| || || || || || || ||||
Sbjct 59126 CGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 59185
Query 131225 A 131225
|
Sbjct 59186 A 59186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472010493037440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |