Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq246 98.7 9e-16
>seq246
Length=239075
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070
|| || ||| | |||||||| ||||||| | || |||||||| || || || |||||
Sbjct 189861 GTCAAAACTCTCACCGGTAAGACCATCACCCTAGAGGTGGAGTCATCCGATACCATCGAC 189802
Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130
| ||| ||||| || |||||||| ||||| || ||||| ||||| | ||
Sbjct 189801 AACGTTAAGTCGAAAATACAAGATAAAGAAGGCATTCCTCCAGACCAGCAGCGCCTAATC 189742
Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190
|| |||||||| || | || || | ||| || | |||||||||||||| || ||
Sbjct 189741 TTCGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTTTCTGATTACAATATTCAGAAGGAG 189682
Query 25191 TCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||| || || || || || | || | |||||||
Sbjct 189681 TCCACTCTTCACTTGGTTCTTCGTCTGCGTGGAGGAA 189645
Score = 91.5 bits (100), Expect = 1e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG-CA 25081
||||| || | || || ||||||| |||||| ||| || ||||| | ||| |
Sbjct 190157 ACCGGAAAGACTATAACCCTCGAAGTTGAGTCGGTTGATACAATCGATAGTGTCAAGTCC 190098
Query 25082 AAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAA 25141
|||| ||| ||||| ||||||||||| |||||||| || || | ||||| ||||||||
Sbjct 190097 AAAATTCAG-GACAAGGAAGGGATTCCTCCTGACCAGCAACGTCTGATTTTCGCCGGCAA 190039
Query 25142 ACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
|| || || || | |||||| | ||||| || ||||| || || || || || ||
Sbjct 190038 GCAGTTGGAGGACGGTCGCACCCTTTCTGATTATAACATTCAGAAGGAGTCAACTCTCCA 189979
Query 25202 TTTAGTGCT 25210
|| || ||
Sbjct 189978 CTTGGTTCT 189970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433325935056665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |