Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq246 147 4e-30
seq257 111 3e-19
seq359 84.2 4e-11
>seq246
Length=239075
Score = 147 bits (162), Expect = 4e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
||||||| || || || | |||||||| || |||||||| || || || || ||||| |
Sbjct 189645 TTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAG 189704
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | || || || | |||||| |||||||| || || | || ||||| || |
Sbjct 189705 AAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAG 189764
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
|||||||||| || ||||| || || | ||| ||| |||||||| || | ||| || |
Sbjct 189765 GAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCA 189824
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
| || | ||||||||| || || ||||| || |||||||
Sbjct 189825 CCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGACGA 189863
Score = 136 bits (150), Expect = 7e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| || || ||||| || || ||||||||||| ||
Sbjct 189955 CCGCCACGAAGACGAAGAACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGAA 190014
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || |||||||| |||||||| || || | ||| ||||| || |||
Sbjct 190015 AGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGGA 190074
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||||||||| ||||| || | |||||| ||||| || || | || || |||
Sbjct 190075 ATCCCTTCCTTGTCCTGAATTTTGGACTTGACACTATCGATTGTATCAACCGACTCAACT 190134
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||| || || ||||| ||
Sbjct 190135 TCGAGGGTTATAGTCTTTCCGGT 190157
>seq257
Length=236519
Score = 111 bits (122), Expect = 3e-19
Identities = 134/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| ||||| |||||||| || || | || || || | |||||| || ||||| ||
Sbjct 59008 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 59067
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || || || |||||||| || || |||||||| || || || | ||| || |||
Sbjct 59068 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGTCG 59127
Query 68394 ATGGTGTCTGCTG-ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
||||| || |||| | || || || | ||||||||| || ||||||||||||||||||||
Sbjct 59128 ATGGTATC-GCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 59186
>seq359
Length=463009
Score = 84.2 bits (92), Expect = 4e-11
Identities = 94/123 (76%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 225515 AGCCATGCCACGTT-GCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573
|||||| ||| || ||| || |||| ||| ||||| |||||||| ||||| || | |||
Sbjct 302307 AGCCATTTCACATTCGCT-ACATCCAAGTGATTTGTCGGTTCGTCGAGAAGGAGAACGTC 302249
Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633
||| || || || || |||| |||| ||||||||||||||| || ||||| || ||
Sbjct 302248 AGCTCTCATAAGCATAGCTCGCGCCAGAGCCAGCTTCATTTTCCATCCACCGGAAAGTGA 302189
Query 225634 GCC 225636
||
Sbjct 302188 CCC 302186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921617895570520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |